RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 TUBA8Q9NY65 449 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 PTBP2Q9UKA9 531 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 DGKBQ9Y6T7 804 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 HTTP42858 3142 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 PTGES3LE9PB15 166 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 DFNA5O60443 496 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 DUSP11O75319 330 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 ZBTB11O95625 1053 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 MLYCDO95822 493 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 ASGR1P07306 291 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 TYMPP19971 482 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 PRKACGP22612 351 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 GDF5P43026 501 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 SUOXP51687 545 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 ARSFP54793 590 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 OXCT1P55809 520 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 C21orf59P57076 290 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 DUSP4Q13115 394 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 AP5B1Q2VPB7 878 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 MILR1Q7Z6M3 343 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 HID1Q8IV36 788 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 DENND1CQ8IV53 801 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 NKAPQ8N5F7 415 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 OR10A6Q8NH74 314 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 GFM2Q969S9 779 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 CCDC97Q96F63 343 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 CD320Q9NPF0 282 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 NLE1Q9NVX2 485 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 A8MX80 341 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 HOXB8P17481 243 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 CTPS1P17812 591 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 SLC6A4P31645 630 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 ZNF140P52738 457 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 EEFSECP57772 596 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 FOXM1Q08050 763 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 TGFBIQ15582 683 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 CCNYL2Q5T2Q4 361 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 CYP20A1Q6UW02 462 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 ENPP6Q6UWR7 440 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 ABI1Q8IZP0 508 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 OR6K2Q8NGY2 324 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 SDCCAG3Q96C92 435 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 CCDC138Q96M89 665 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 EGFL8Q99944 293 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 SEPT3Q9UH03 358 aa11.78□□□□□ -0.52
RAPGEF3-219ENST00000549151 IGLV3-10A0A075B6K4 115 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 SH3PXD2BA1X283 911 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 FAM234BA2RU67 622 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 DEAF1O75398 565 aaPredicted RBP11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 HSPA7P48741 367 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 HMGCS1Q01581 520 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 MGAT3Q09327 533 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 TYSND1Q2T9J0 566 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 SPESP1Q6UW49 350 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 ZNF554Q86TJ5 538 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 OR4F6Q8NGB9 312 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 ANGPTL3Q9Y5C1 460 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 RAI2Q9Y5P3 530 aa11.77□□□□□ -0.52
RAPGEF3-219ENST00000549151 TANC1Q9C0D5 1861 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 E2F3O00716 465 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 E2F6O75461 281 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PARNO95453 639 aaKnown RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 LPOP22079 712 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 HOXD9P28356 352 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 HUNKP57058 714 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 ABRAXAS2Q15018 415 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 MEP1AQ16819 746 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 FAM98BQ52LJ0 330 aaKnown RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 CTSL3PQ5NE16 218 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 CD200R1Q8TD46 325 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 CGREF1Q99674 301 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 ARMC7Q9H6L4 198 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PRM3Q9NNZ6 103 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PFDN4Q9NQP4 134 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 FNIP2Q9P278 1114 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PCDHGA11Q9Y5H2 935 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 INSIG1O15503 277 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 ENO2P09104 434 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 THRBP10828 461 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 CCNA2P20248 432 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PHEXP78562 749 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 EMX2Q04743 252 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 XKR7Q5GH72 579 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 GALNT18Q6P9A2 607 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 R3HCC1LQ7Z5L2 792 aaKnown RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 ZDHHC13Q8IUH4 622 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 CLDN19Q8N6F1 224 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 SMYD1Q8NB12 490 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 TBC1D15Q8TC07 691 aa11.77□□□□□ -0.53
RAPGEF3-219ENST00000549151 TADA1Q96BN2 335 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms