RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 SPANXN3Q5MJ09 141 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 RNF187Q5TA31 235 aaPredicted RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 ABRAXAS1Q6UWZ7 409 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 LMNTD2Q8IXW0 634 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 SFRP1Q8N474 314 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 CLDN19Q8N6F1 224 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 OTUD6BQ8N6M0 293 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 BEND7Q8N7W2 519 aaPredicted RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 HM13Q8TCT9 377 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 MAPK15Q8TD08 544 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 CALML6Q8TD86 181 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 CCDC97Q96F63 343 aaPredicted RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 TRIM56Q9BRZ2 755 aaKnown RBP16.52■□□□□ 0.24
CCDC38-203ENST00000546803 CCM2Q9BSQ5 444 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 GRHL1Q9NZI5 618 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 ACSL5Q9ULC5 683 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 VPS9D1Q9Y2B5 631 aa16.52■□□□□ 0.24
CCDC38-203ENST00000546803 E7ESA3 106 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 PRMT5O14744 637 aaPredicted RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 EIF3HO15372 352 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 ZW10O43264 779 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 NDUFS3O75489 264 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 EML2O95834 649 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 FTH1P02794 183 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 PBLDP30039 288 aaPredicted RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 ELK3P41970 407 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 FASLGP48023 281 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 MAZP56270 477 aaKnown RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 CRYMQ14894 314 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 TYSND1Q2T9J0 566 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 METRNLQ641Q3 311 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 CENPUQ71F23 418 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 RAB44Q7Z6P3 723 aaPredicted RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 LRRC6Q86X45 466 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 SFTPA2Q8IWL1 248 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 PNPLA1Q8N8W4 532 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 WDR48Q8TAF3 677 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 GABPB2Q8TAK5 448 aaPredicted RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 SLC37A2Q8TED4 501 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 PATE1Q8WXA2 126 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 SEC14L1Q92503 715 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 ART4Q93070 314 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 PWWP2AQ96N64 755 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 ABCG4Q9H172 646 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 STN1Q9H668 368 aaKnown RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 SARS2Q9NP81 518 aaKnown RBP16.51■□□□□ 0.23
CCDC38-203ENST00000546803 LRIT1Q9P2V4 623 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 TEX264Q9Y6I9 313 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 RNF215Q9Y6U7 377 aa16.51■□□□□ 0.23
CCDC38-203ENST00000546803 RHPN2P1A8MT19 583 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 GOLGA8KD6RF30 607 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 GOLGA8TH3BQL2 631 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF500O60304 480 aaPredicted RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 OPA1O60313 960 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 OR1I1O60431 355 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 BANF1O75531 89 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 HALP42357 657 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 GPR3P46089 330 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 PDIA2Q13087 525 aaKnown RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 NFE2L1Q14494 772 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 PERM1Q5SV97 790 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF449Q6P9G9 518 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 DHRS13Q6UX07 377 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 FAM83HQ6ZRV2 1179 aaPredicted RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 ZNF438Q7Z4V0 828 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 LDB1Q86U70 411 aaPredicted RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 SLC9B2Q86UD5 537 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 CILP2Q8IUL8 1156 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 IGDCC3Q8IVU1 814 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 CFAP206Q8IYR0 622 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 NOA1Q8NC60 698 aaKnown RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 NAT14Q8WUY8 206 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 CCDC74AQ96AQ1 378 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 SH3KBP1Q96B97 665 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 CCDC3Q9BQI4 270 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 TSSK1BQ9BXA7 367 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 FOXP3Q9BZS1 431 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 PHACTR1Q9C0D0 580 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 C20orf96Q9NUD7 363 aaPredicted RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 INTS10Q9NVR2 710 aaKnown RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 ZC3H7BQ9UGR2 993 aaKnown RBP16.5■□□□□ 0.23
CCDC38-203ENST00000546803 PRSS21Q9Y6M0 314 aa16.5■□□□□ 0.23
CCDC38-203ENST00000546803 TP53BP1Q12888 1972 aaPredicted RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 CFAP54Q96N23 3096 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 LRP4O75096 1905 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 TRBV23OR9-2A0A075B6M9 112 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 XRCC1P18887 633 aaPredicted RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 RPS3P23396 243 aaKnown RBP eCLIP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 RPL10P27635 214 aaKnown RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 PLTPP55058 493 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 ADARP55265 1226 aaKnown RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 PLOD1Q02809 727 aaPredicted RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 HHEXQ03014 270 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 RPA4Q13156 261 aa16.49■□□□□ 0.23
CCDC38-203ENST00000546803 FRG1Q14331 258 aaKnown RBP16.49■□□□□ 0.23
CCDC38-203ENST00000546803 NR1D2Q14995 579 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms