RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SPO11Q9Y5K1 396 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 SCN8AQ9UQD0 1980 aa7.29□□□□□ -1.24
CPSF7-224ENST00000544990 UNC13CQ8NB66 2214 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 GLYATL1P3A0A0U1RQE8 302 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 TCRBV7S2A1N4TA0A589 114 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 ERI2A8K979 691 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 RHPN2P1A8MT19 583 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 TMX2-CTNND1H3BSU7 103 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 GRID2O43424 1007 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 LIASO43766 372 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 NUDT21O43809 227 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 NOBOXO60393 691 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 CSO75390 466 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 CDK14O94921 469 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 SLC2A4P14672 509 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 EPHA1P21709 976 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 MSNP26038 577 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 ARNTP27540 789 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 ADRA1AP35348 466 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 GMPRP36959 345 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 FDFT1P37268 417 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 HADHAP40939 763 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 CLDN6P56747 220 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 CYP4F3Q08477 520 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 GTF2H3Q13889 308 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 HLTFQ14527 1009 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 RTP5Q14D33 572 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 CERCAMQ5T4B2 595 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 CDCP2Q5VXM1 449 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 LINC00523Q86TU6 105 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 LRRTM4Q86VH4 590 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 NRROSQ86YC3 692 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 SULF2Q8IWU5 870 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 LSMEM2Q8N112 164 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 TTC30BQ8N4P2 665 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 PHC3Q8NDX5 983 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 GFM1Q96RP9 751 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 C19orf43Q9BQ61 176 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 TBL1YQ9BQ87 522 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 APOL2Q9BQE5 337 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 GORASP1Q9BQQ3 440 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 OR2AG1Q9H205 316 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 LRRN3Q9H3W5 708 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 STN1Q9H668 368 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 SOX17Q9H6I2 414 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 SYNDIG1Q9H7V2 258 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 LRRC40Q9H9A6 602 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 ARNT2Q9HBZ2 717 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 IL26Q9NPH9 171 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 HOMER3Q9NSC5 361 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 SPATS2LQ9NUQ6 558 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 ATXN10Q9UBB4 475 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 DKK4Q9UBT3 224 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 APPL1Q9UKG1 709 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 R3HDM2Q9Y2K5 976 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 ZKSCAN5Q9Y2L8 839 aa7.28□□□□□ -1.24
CPSF7-224ENST00000544990 OAS3Q9Y6K5 1087 aaKnown RBP7.28□□□□□ -1.24
CPSF7-224ENST00000544990 OR5K4A6NMS3 321 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 E7EVH7 732 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 NTN3O00634 580 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 CHUKO15111 745 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 KMOO15229 486 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 BUD23O43709 281 aaKnown RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 CEP104O60308 925 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 KCNJ13O60928 360 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 USP12O75317 370 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 METTL18O95568 372 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ECEL1O95672 775 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 GAS8O95995 478 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 IFNB1P01574 187 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 FGGP02679 453 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 RPLP0P05388 317 aaKnown RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ACP5P13686 325 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF8P17098 575 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 VCLP18206 1134 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 LMAN1P49257 510 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 CLCNKAP51800 687 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 CCL7P80098 99 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 TMEM115Q12893 351 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 SNX1Q13596 522 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 SPARCL1Q14515 664 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 OASLQ15646 514 aaKnown RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 CHRNA6Q15825 494 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 CCNG2Q16589 344 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 LONRF2Q1L5Z9 754 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 INSCQ1MX18 579 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ISXQ2M1V0 245 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ATP13A5Q4VNC0 1218 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 LDLRAP1Q5SW96 308 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 KCTD11Q693B1 232 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 DRICH1Q6PGQ1 229 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 FAM151BQ6UXP7 276 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 C4orf22Q6V702 233 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 C1orf229Q6ZS94 237 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ADGRG6Q86SQ4 1221 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 C17orf82Q86X59 251 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-224ENST00000544990 PROSER1Q86XN7 944 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 KLHDC8BQ8IXV7 354 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 NAGSQ8N159 534 aa7.27□□□□□ -1.25
CPSF7-224ENST00000544990 ARL14Q8N4G2 192 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms