RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 HM13Q8TCT9 377 aa18.07■□□□□ 0.48
COPS7A-216ENST00000543170 SIGLEC10Q96LC7 697 aa18.07■□□□□ 0.48
COPS7A-216ENST00000543170 RABGEF1Q9UJ41 708 aa18.07■□□□□ 0.48
COPS7A-216ENST00000543170 ANAPC5Q9UJX4 755 aa18.07■□□□□ 0.48
COPS7A-216ENST00000543170 DNAJC16Q9Y2G8 782 aa18.07■□□□□ 0.48
COPS7A-216ENST00000543170 MSRB2Q9Y3D2 182 aa18.07■□□□□ 0.48
COPS7A-216ENST00000543170 F8W8V4 182 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 NTN3O00634 580 aaPredicted RBP18.06■□□□□ 0.48
COPS7A-216ENST00000543170 ZW10O43264 779 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 SNX2O60749 519 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 USP1O94782 785 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 TOP3BO95985 862 aaKnown RBP18.06■□□□□ 0.48
COPS7A-216ENST00000543170 TTPAP49638 278 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 SPRED1Q7Z699 444 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 CCNJLQ8IV13 435 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 AGGF1Q8N302 714 aaeCLIP18.06■□□□□ 0.48
COPS7A-216ENST00000543170 DCBLD1Q8N8Z6 715 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 ABCG4Q9H172 646 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 PRDM8Q9NQV8 689 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 POT1Q9NUX5 634 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 KLK13Q9UKR3 277 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 MRFAP1Q9Y605 127 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 KNTC1P50748 2209 aa18.06■□□□□ 0.48
COPS7A-216ENST00000543170 RHPN2P1A8MT19 583 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 PDZK1P1A8MUH7 402 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 TP73O15350 636 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 CD3EAPO15446 510 aaKnown RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 RAD51CO43502 376 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 VAPBO95292 243 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 BRAFP15056 766 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 XRCC1P18887 633 aaPredicted RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ARCN1P48444 511 aaKnown RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ITGA8P53708 1063 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 UBE2IP63279 158 aaKnown RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 HHEXQ03014 270 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 BIRC2Q13490 618 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 NFE2L1Q14494 772 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 SEMA3AQ14563 771 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 CLPPQ16740 277 aaPredicted RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 TYSND1Q2T9J0 566 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ANKRD20A4Q4UJ75 823 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ZNF658BQ4V348 819 aaPredicted RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 METRNLQ641Q3 311 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 PDIK1LQ8N165 341 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 BEND7Q8N7W2 519 aaPredicted RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 GPR150Q8NGU9 434 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 KIF18AQ8NI77 898 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ZNF592Q92610 1267 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 SH3KBP1Q96B97 665 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ZNF669Q96BR6 464 aaPredicted RBP18.05■□□□□ 0.48
COPS7A-216ENST00000543170 LRRC39Q96DD0 335 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 STAMBPL1Q96FJ0 436 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ERP44Q9BS26 406 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 NAT9Q9BTE0 207 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 UCK1Q9HA47 277 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ACSL5Q9ULC5 683 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 CLCA2Q9UQC9 943 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 RPS6KL1Q9Y6S9 549 aa18.05■□□□□ 0.48
COPS7A-216ENST00000543170 ZCWPW2A0A1B0GU75 182 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 PPM1DO15297 605 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 TTC4O95801 387 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 MT-CO3P00414 261 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 FTH1P02794 183 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 PGAM1P18669 254 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 OGNP20774 298 aaKnown RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 PBLDP30039 288 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 HALP42357 657 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 RPL21P46778 160 aaKnown RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 DHX9Q08211 1270 aaKnown RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 CBLBQ13191 982 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 SPIDRQ14159 915 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 RNF187Q5TA31 235 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 MRNIPQ6NTE8 343 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 CES3Q6UWW8 571 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 XKR5Q6UX68 686 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 CCNI2Q6ZMN8 369 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 FAM83HQ6ZRV2 1179 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 RBM12BQ8IXT5 1001 aaKnown RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 LMNTD2Q8IXW0 634 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 CLDN19Q8N6F1 224 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 GRAMD1AQ96CP6 724 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 DEPDC7Q96QD5 511 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 CCM2Q9BSQ5 444 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 RAB17Q9H0T7 212 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 LRRN3Q9H3W5 708 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 SCHIP1Q9P0W5 487 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 WHRNQ9P202 907 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 MARCH4Q9P2E8 410 aaPredicted RBP18.04■□□□□ 0.48
COPS7A-216ENST00000543170 CPNE7Q9UBL6 633 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 MAD1L1Q9Y6D9 718 aa18.04■□□□□ 0.48
COPS7A-216ENST00000543170 A0A1W2PQM1 296 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 LILRA5A6NI73 299 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 D6RAR5 112 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 PFDN6O15212 129 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 RPLP0P05388 317 aaKnown RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 POLBP06746 335 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 OR56A5P0C7T3 313 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 SPINK2P20155 84 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 RPL10P27635 214 aaKnown RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 EPHA4P54764 986 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms