RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZNF778Q96MU6 729 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 ARHGAP9Q9BRR9 750 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 C1QTNF2Q9BXJ5 285 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SYBUQ9NX95 663 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SEPT10Q9P0V9 454 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SIRPGQ9P1W8 387 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 C15orf41Q9Y2V0 281 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 WASF2Q9Y6W5 498 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 H0Y3Z8 333 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SUV39H1O43463 412 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SMAD6O43541 496 aaKnown RBP8.18□□□□□ -1.1
NEDD8-207ENST00000533242 DAB1O75553 588 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 LYPLA1O75608 230 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-207ENST00000533242 LEFTY1O75610 366 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 PAK4O96013 591 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-207ENST00000533242 ANXA6P08133 673 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 NEFHP12036 1026 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 EZRP15311 586 aaKnown RBP8.18□□□□□ -1.1
NEDD8-207ENST00000533242 ITGB6P18564 788 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SLC5A2P31639 672 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SCNN1AP37088 669 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 PGGT1BP53609 377 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 PFN3P60673 137 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 CDK16Q00536 496 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 NIPAL4Q0D2K0 466 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SGCGQ13326 291 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 DPYSQ14117 519 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 PTK2BQ14289 1009 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 EFHC1Q5JVL4 640 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 CASC4Q6P4E1 433 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 RINLQ6ZS11 566 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 CCDC91Q7Z6B0 441 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 SETD3Q86TU7 594 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-207ENST00000533242 FBXO39Q8N4B4 442 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 CCNYQ8ND76 341 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 LRRC39Q96DD0 335 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 CCDC3Q9BQI4 270 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 EBF4Q9BQW3 602 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 FRMD8Q9BZ67 464 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-207ENST00000533242 CEP44Q9C0F1 390 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 PADI4Q9UM07 663 aa8.18□□□□□ -1.1
NEDD8-207ENST00000533242 LMO7DNF2Z398 122 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 FCHO1O14526 889 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 KLF11O14901 512 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 PLD2O14939 933 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 SPINT1O43278 529 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TSPAN6O43657 245 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ITM2AO43736 263 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 NOBOXO60393 691 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 PAGE1O75459 146 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 CNTN5O94779 1100 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 HAUS5O94927 633 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TGDSO95455 350 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ERVK-10P10266 1014 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 CCND1P24385 295 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 PTPN4P29074 926 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ARL4AP40617 200 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TMPRSS15P98073 1019 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 CRYMQ14894 314 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TPRG1LQ5T0D9 272 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 STEAP4Q687X5 459 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ESRP1Q6NXG1 681 aaKnown RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 DPY19L3Q6ZPD9 716 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 RFX8Q6ZV50 586 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 PHACTR4Q8IZ21 702 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 PCDH20Q8N6Y1 951 aaKnown RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 RAB7BQ96AH8 199 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 AGAP3Q96P47 875 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 NCAPGQ9BPX3 1015 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 HEPHQ9BQS7 1158 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 STRADBQ9C0K7 418 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TNKS2Q9H2K2 1166 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ZNF358Q9NW07 568 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TAS2R1Q9NYW7 299 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 APOBEC3BQ9UH17 382 aaKnown RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 LNPEPQ9UIQ6 1025 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TOR1BO14657 336 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 SNNO75324 88 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 TPBGLP0DKB5 382 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 LIPCP11150 499 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ZFXP17010 805 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ERCC2P18074 760 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 GNAZP19086 355 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 NOS2P35228 1153 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 UGT1A5P35504 534 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ALFQ53S48 1182 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 CARD16Q5EG05 197 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 LINGO4Q6UY18 593 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 PACS1Q6VY07 963 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ZNF783Q6ZMS7 281 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 RAB11FIP2Q7L804 512 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 SPNS2Q8IVW8 549 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ZNF683Q8IZ20 524 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 RBFAQ8N0V3 343 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ACVR1CQ8NER5 493 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 OR52K1Q8NGK4 314 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 N4BP2L2Q92802 583 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 IQCGQ9H095 443 aaKnown RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 SYNDIG1Q9H7V2 258 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms