RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CD72P21854 359 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 SFNP31947 248 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 PBX3P40426 434 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 PRKCEQ02156 737 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 GOLGA8FQ08AF8 430 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 SIGLEC14Q08ET2 396 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 FBXO43Q4G163 708 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 ANKRD54Q6NXT1 300 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 GJB7Q6PEY0 223 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 TMEM184AQ6ZMB5 413 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 ECHDC2Q86YB7 292 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 PRSS33Q8NF86 280 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 WASF1Q92558 559 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 ATOH1Q92858 354 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-213ENST00000530784 JAKMIP1Q96N16 626 aaKnown RBP7.12□□□□□ -1.27
CSDE1-213ENST00000530784 CASD1Q96PB1 797 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 GFM1Q96RP9 751 aaKnown RBP7.12□□□□□ -1.27
CSDE1-213ENST00000530784 RIT2Q99578 217 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 MRPL9Q9BYD2 267 aaKnown RBP7.12□□□□□ -1.27
CSDE1-213ENST00000530784 LHPPQ9H008 270 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 NRBP2Q9NSY0 501 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 SPG21Q9NZD8 308 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 WNT16Q9UBV4 365 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 PLXNA4Q9HCM2 1894 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 HIDE1A8MVS5 230 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 MSH4O15457 936 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 IRAK2O43187 625 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 DARSP14868 501 aaKnown RBP7.11□□□□□ -1.27
CSDE1-213ENST00000530784 HOXB8P17481 243 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-213ENST00000530784 SP100P23497 879 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-213ENST00000530784 YWHAQP27348 245 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 CA8P35219 290 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 HNF1BP35680 557 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 GPC3P51654 580 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 ARL4CP56559 192 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 KCNC3Q14003 757 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 SMC1AQ14683 1233 aaKnown RBP7.11□□□□□ -1.27
CSDE1-213ENST00000530784 CLLU1OSQ5K130 101 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 ATG9BQ674R7 924 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 NAPEPLDQ6IQ20 393 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 DENND1BQ6P3S1 775 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 BLOC1S2Q6QNY1 142 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 CENPQQ7L2Z9 268 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-213ENST00000530784 SLC39A11Q8N1S5 342 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 ANKRD42Q8N9B4 389 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 CASP10Q92851 521 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 PHF21BQ96EK2 531 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 MED30Q96HR3 178 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 TEKT3Q9BXF9 490 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 SLC26A6Q9BXS9 759 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 S1PR5Q9H228 398 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 VPS54Q9P1Q0 977 aa7.11□□□□□ -1.27
CSDE1-213ENST00000530784 BRWD1Q9NSI6 2320 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 A0A0U1RQF3 1178 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 CLEC18AA5D8T8 446 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 IL1AP01583 271 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 IFNAR1P17181 557 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 NLRP5P59047 1200 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 KRTAP10-9P60411 292 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 DHX8Q14562 1220 aaKnown RBP7.1□□□□□ -1.27
CSDE1-213ENST00000530784 RPE65Q16518 533 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 UGCGQ16739 394 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 CES5AQ6NT32 575 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 PALB2Q86YC2 1186 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 TMC8Q8IU68 726 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 MRPL43Q8N983 215 aaKnown RBP7.1□□□□□ -1.27
CSDE1-213ENST00000530784 TEX45Q8NA69 505 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 CLEC18CQ8NCF0 446 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 RDM1Q8NG50 284 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 OR4N2Q8NGD1 307 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 NUDCD2Q8WVJ2 157 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 RSPH1Q8WYR4 309 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 COG8Q96MW5 612 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 NECTIN4Q96NY8 510 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 NPLQ9BXD5 320 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-213ENST00000530784 GCOM2Q9BZD3 368 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-213ENST00000530784 UNC45AQ9H3U1 944 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 RASSF1Q9NS23 344 aa7.1□□□□□ -1.27
CSDE1-213ENST00000530784 FAM157AC9JC47 383 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 KIF1CO43896 1103 aaKnown RBP7.09□□□□□ -1.27
CSDE1-213ENST00000530784 CSDE1O75534 798 aaKnown RBP7.09□□□□□ -1.27
CSDE1-213ENST00000530784 PSMD10O75832 226 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 CBSLP0DN79 551 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 PSMA5P28066 241 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 HSPA4P34932 840 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 CBSP35520 551 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 MTHFRP42898 656 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 VCPP55072 806 aaKnown RBP7.09□□□□□ -1.27
CSDE1-213ENST00000530784 DRP2Q13474 957 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 XKR3Q5GH77 459 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 TWF2Q6IBS0 349 aaKnown RBP7.09□□□□□ -1.27
CSDE1-213ENST00000530784 MIER3Q7Z3K6 550 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 UBALD2Q8IYN6 164 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 FBXL16Q8N461 479 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 TMEM163Q8TC26 289 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 TBCKQ8TEA7 893 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 TMEM18Q96B42 140 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 AGXT2Q9BYV1 514 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 ZBP1Q9H171 429 aa7.09□□□□□ -1.27
CSDE1-213ENST00000530784 SLCO5A1Q9H2Y9 848 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms