RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 KLHL9Q9P2J3 617 aa5.77□□□□□ -1.49
CASP4-208ENST00000530309 NFKBIL1Q9UBC1 381 aaPredicted RBP5.77□□□□□ -1.49
CASP4-208ENST00000530309 TRPV2Q9Y5S1 764 aa5.77□□□□□ -1.49
CASP4-208ENST00000530309 CKAP5Q14008 2032 aa5.77□□□□□ -1.49
CASP4-208ENST00000530309 ASTN2O75129 1339 aaPredicted RBP5.76□□□□□ -1.49
CASP4-208ENST00000530309 ZNF541Q9H0D2 1346 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 IGHV4OR15-8A0A075B7B6 117 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 SAA2-SAA4A0A096LPE2 208 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 ZCWPW2A0A1B0GU75 182 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 PLK4O00444 970 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 BUD23O43709 281 aaKnown RBP5.76□□□□□ -1.49
CASP4-208ENST00000530309 CREG1O75629 220 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 BCL10O95999 233 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 FAM106CPP0CH98 169 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 MATR3P43243 847 aaKnown RBP eCLIP5.76□□□□□ -1.49
CASP4-208ENST00000530309 PLIN5Q00G26 463 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 C9orf57Q5W0N0 161 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 RPUSD3Q6P087 351 aaKnown RBP5.76□□□□□ -1.49
CASP4-208ENST00000530309 RAD9BQ6WBX8 426 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 ADIPOR2Q86V24 386 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 CCDC191Q8NCU4 936 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 OR52I2Q8NH67 350 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 BBS10Q8TAM1 723 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 LNX1Q8TBB1 728 aaPredicted RBP5.76□□□□□ -1.49
CASP4-208ENST00000530309 PHF21AQ96BD5 680 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 IGSF21Q96ID5 467 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 DGAT2Q96PD7 388 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 DUX5Q96PT3 197 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 NEURL2Q9BR09 285 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 CCDC106Q9BWC9 280 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 SEMA6AQ9H2E6 1030 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 CRNNQ9UBG3 495 aaPredicted RBP5.76□□□□□ -1.49
CASP4-208ENST00000530309 ANAPC2Q9UJX6 822 aa5.76□□□□□ -1.49
CASP4-208ENST00000530309 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 ANKRD66B4E2M5 251 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 TMEM178BH3BS89 294 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 UBE2CO00762 179 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 PRAMEF11O60813 436 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 WDR1O75083 606 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 WISP2O76076 250 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 CDH1P12830 882 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 CCKARP32238 428 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 CAPZA2P47755 286 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 SNRPEP62304 92 aaKnown RBP5.75□□□□□ -1.49
CASP4-208ENST00000530309 UBXN2AP68543 259 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 MELKQ14680 651 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 ZNF585BQ52M93 769 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 C9orf152Q5JTZ5 239 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 ALS2CLQ60I27 953 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 ZNF324BQ6AW86 544 aaPredicted RBP5.75□□□□□ -1.49
CASP4-208ENST00000530309 OR7E24Q6IFN5 339 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 PRSS57Q6UWY2 283 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 UNQ6126/PRO20091Q6UXV3 157 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 CEP57Q86XR8 500 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 MUC20Q8N307 709 aaPredicted RBP5.75□□□□□ -1.49
CASP4-208ENST00000530309 TAS1R2Q8TE23 839 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 TTC14Q96N46 770 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 NEK1Q96PY6 1258 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 KLHL1Q9NR64 748 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 POU2F3Q9UKI9 436 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 RALYQ9UKM9 306 aaKnown RBP5.75□□□□□ -1.49
CASP4-208ENST00000530309 DLGAP4Q9Y2H0 992 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 YIPF1Q9Y548 306 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 RPS6KL1Q9Y6S9 549 aa5.75□□□□□ -1.49
CASP4-208ENST00000530309 PLSCR5A0PG75 271 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 C15orf62A8K5M9 175 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 EIF3DO15371 548 aaKnown RBP eCLIP5.74□□□□□ -1.49
CASP4-208ENST00000530309 KCNAB3O43448 404 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 BMP10O95393 424 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 GM2AP17900 193 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 IL15P40933 162 aaPredicted RBP5.74□□□□□ -1.49
CASP4-208ENST00000530309 SNTB1Q13884 538 aaKnown RBP5.74□□□□□ -1.49
CASP4-208ENST00000530309 IZUMO4Q1ZYL8 232 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 CBWD6Q4V339 395 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 CBWD3Q5JTY5 395 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 ERMARDQ5T6L9 678 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 IRAK1BP1Q5VVH5 260 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.74□□□□□ -1.49
CASP4-208ENST00000530309 PLEKHM3Q6ZWE6 761 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 TUBA1AQ71U36 451 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 FBXO39Q8N4B4 442 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 LMO3Q8TAP4 145 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 WDR20Q8TBZ3 569 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 ERLEC1Q96DZ1 483 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 IL17FQ96PD4 163 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 TUBA1CQ9BQE3 449 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 C1QTNF4Q9BXJ3 329 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 LRRC4Q9HBW1 653 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 PCDHGB1Q9Y5G3 927 aa5.74□□□□□ -1.49
CASP4-208ENST00000530309 TCRBV21S2A2A0A5A6 115 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 ACOT8O14734 319 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 TCERG1O14776 1098 aaKnown RBP5.73□□□□□ -1.49
CASP4-208ENST00000530309 TO15178 435 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 SSX4O60224 188 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 FGF3P11487 239 aaPredicted RBP5.73□□□□□ -1.49
CASP4-208ENST00000530309 ARCN1P48444 511 aaKnown RBP5.73□□□□□ -1.49
CASP4-208ENST00000530309 FUT6P51993 359 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 ALCAMQ13740 583 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 IL11RAQ14626 422 aa5.73□□□□□ -1.49
CASP4-208ENST00000530309 ASIC2Q16515 512 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms