RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 SLC1A6P48664 564 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 DNAJB13P59910 316 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 MAP7D1Q3KQU3 841 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 ACSBG2Q5FVE4 666 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TBC1D3GQ6DHY5 549 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TBC1D3CQ6IPX1 549 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 NEK5Q6P3R8 708 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 SYT13Q7L8C5 426 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 PIWIL4Q7Z3Z4 852 aaKnown RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 SPATA21Q7Z572 469 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TRIM74Q86UV6 250 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 FAM124AQ86V42 546 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 HORMAD1Q86X24 394 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 SLC22A9Q8IVM8 553 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TBC1D3Q8IZP1 549 aaPredicted RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 HMGB4Q8WW32 186 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 EXT2Q93063 718 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 HIC2Q96JB3 615 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 KDM4CQ9H3R0 1056 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 EPHX3Q9H6B9 360 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TRIM39Q9HCM9 518 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 IKZF3Q9UKT9 509 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 NEMP2A6NFY4 417 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 SYCE1LA8MT33 242 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 EIF3FO00303 357 aaPredicted RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 ATG13O75143 517 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 IPO13O94829 963 aaKnown RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 TPBGLP0DKB5 382 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 ENO3P13929 434 aaPredicted RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 TEAD1P28347 426 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 PRLHRP49683 370 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TPMTP51580 245 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 CTSCP53634 463 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 ABCE1P61221 599 aaKnown RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 NFKB2Q00653 900 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 GTF2H3Q13889 308 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 FGL2Q14314 439 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 NAPRTQ6XQN6 538 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 SIX5Q8N196 739 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 COX14Q96I36 57 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 SEC16BQ96JE7 1060 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 LENG8Q96PV6 779 aaPredicted RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 NELL2Q99435 816 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 C1QTNF7Q9BXJ2 289 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 SLC17A9Q9BYT1 436 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 OR2AG1Q9H205 316 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 ZNF395Q9H8N7 513 aaPredicted RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 CYP4F12Q9HCS2 524 aa16.37■□□□□ 0.21
PACS1-209ENST00000529757 TSR3Q9UJK0 312 aaKnown RBP16.37■□□□□ 0.21
PACS1-209ENST00000529757 UBXN8O00124 270 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 ITM2AO43736 263 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 VEGFDO43915 354 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 CDK14O94921 469 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 PAK4O96013 591 aaPredicted RBP16.36■□□□□ 0.21
PACS1-209ENST00000529757 TROVE2P10155 538 aaKnown RBP eCLIP16.36■□□□□ 0.21
PACS1-209ENST00000529757 NAGLUP54802 743 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 SF3A3Q12874 501 aaKnown RBP eCLIP16.36■□□□□ 0.21
PACS1-209ENST00000529757 OVGP1Q12889 678 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 IRF4Q15306 451 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 BCL7AQ4VC05 210 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 PLEKHS1Q5SXH7 462 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 TMEM220Q6QAJ8 160 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 ADGRG6Q86SQ4 1221 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 ADAMTSL2Q86TH1 951 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 HEATR4Q86WZ0 1026 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 CRLF3Q8IUI8 442 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 UBALD2Q8IYN6 164 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 CACNA2D3Q8IZS8 1091 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 BEND7Q8N7W2 519 aaPredicted RBP16.36■□□□□ 0.21
PACS1-209ENST00000529757 TP53I13Q8NBR0 393 aaPredicted RBP16.36■□□□□ 0.21
PACS1-209ENST00000529757 PPP4R1Q8TF05 950 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 ELMO1Q92556 727 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 KLK6Q92876 244 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 FUBP1Q96AE4 644 aaKnown RBP16.36■□□□□ 0.21
PACS1-209ENST00000529757 C20orf27Q9GZN8 174 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 MBNL1Q9NR56 388 aaKnown RBP16.36■□□□□ 0.21
PACS1-209ENST00000529757 NCKIPSDQ9NZQ3 722 aa16.36■□□□□ 0.21
PACS1-209ENST00000529757 FAM170BA6NMN3 283 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 SUPT3HB4E1H0 165 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 SUPT3HO75486 399 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 LYPLA1O75608 230 aaPredicted RBP16.35■□□□□ 0.21
PACS1-209ENST00000529757 TGDSO95455 350 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 CDK3Q00526 305 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 HSPA14Q0VDF9 509 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 BOP1Q14137 746 aaKnown RBP16.35■□□□□ 0.21
PACS1-209ENST00000529757 GBX1Q14549 363 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 TRIM67Q6ZTA4 783 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 GPSM1Q86YR5 675 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 PGBD3Q8N328 593 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 CCNYL1Q8N7R7 359 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 CCDC197Q8NCU1 140 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 PHF21BQ96EK2 531 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 ZNF514Q96K75 400 aaPredicted RBP16.35■□□□□ 0.21
PACS1-209ENST00000529757 CCM2Q9BSQ5 444 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 TRIM55Q9BYV6 548 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 FOXQ1Q9C009 403 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 DRC3Q9H069 523 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 BTBD1Q9H0C5 482 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 CD93Q9NPY3 652 aa16.35■□□□□ 0.21
PACS1-209ENST00000529757 ITM2CQ9NQX7 267 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms