RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 TMEM237Q96Q45 408 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 STN1Q9H668 368 aaKnown RBP20.2■□□□□ 0.82
SMCO4-203ENST00000526869 PREBQ9HCU5 417 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 NUDT4Q9NZJ9 180 aa20.2■□□□□ 0.82
SMCO4-203ENST00000526869 IGLON5A6NGN9 336 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 STX16-NPEPL1H3BU86 382 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 UBXN8O00124 270 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 STX16O14662 325 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 PCDH8O95206 1070 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 MPC1LP0DKB6 136 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 CCR7P32248 378 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 HERVK_113P63132 956 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 RPS21P63220 83 aaKnown RBP20.19■□□□□ 0.82
SMCO4-203ENST00000526869 TMEM115Q12893 351 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-203ENST00000526869 PRKAA1Q13131 559 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 MAP7D1Q3KQU3 841 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 ACSBG2Q5FVE4 666 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 NEK10Q6ZWH5 1172 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 YTHDF3Q7Z739 585 aaKnown RBP20.19■□□□□ 0.82
SMCO4-203ENST00000526869 CACUL1Q86Y37 369 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 CCNYL1Q8N7R7 359 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 PTGR2Q8N8N7 351 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-203ENST00000526869 RASGEF1AQ8N9B8 481 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 RPLP0P6Q8NHW5 317 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 GANCQ8TET4 914 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 STON2Q8WXE9 905 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 SIPA1Q96FS4 1042 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 ZNF514Q96K75 400 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-203ENST00000526869 C1QTNF3Q9BXJ4 246 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 C1QTNF2Q9BXJ5 285 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 ERVK-6Q9BXR3 956 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 ILKAPQ9H0C8 392 aaPredicted RBP20.19■□□□□ 0.82
SMCO4-203ENST00000526869 KDM4CQ9H3R0 1056 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 KCNK13Q9HB14 408 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 NCKAP1Q9Y2A7 1128 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 XIRP2A4UGR9 3374 aa20.19■□□□□ 0.82
SMCO4-203ENST00000526869 PIKFYVEQ9Y2I7 2098 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 CCT8L1PA6NM43 557 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 SUPT3HB4E1H0 165 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 K7ESM1 405 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 VEGFDO43915 354 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ATG13O75143 517 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 SUPT3HO75486 399 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 DCTN3O75935 186 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 GFAPP14136 432 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 IL9P15248 144 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ARFIP2P53365 341 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ALDH18A1P54886 795 aaKnown RBP20.18■□□□□ 0.82
SMCO4-203ENST00000526869 TMEM259Q4ZIN3 620 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ARL13AQ5H913 290 aaPredicted RBP20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ZNF678Q5SXM1 525 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 CYHR1Q6ZMK1 362 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ZNF852Q6ZMS4 543 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ATG14Q6ZNE5 492 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 FRMD7Q6ZUT3 714 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 DET1Q7L5Y6 550 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 LSMEM2Q8N112 164 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 SYNPOQ8N3V7 929 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 FBXO39Q8N4B4 442 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ASB12Q8WXK4 309 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 COX14Q96I36 57 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 ASB2Q96Q27 587 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 FAM126AQ9BYI3 521 aaPredicted RBP20.18■□□□□ 0.82
SMCO4-203ENST00000526869 EML4Q9HC35 981 aaKnown RBP20.18■□□□□ 0.82
SMCO4-203ENST00000526869 TRIM39Q9HCM9 518 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 CYP4F12Q9HCS2 524 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 DCTN4Q9UJW0 460 aa20.18■□□□□ 0.82
SMCO4-203ENST00000526869 SLCO1B7G3V0H7 640 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 INPP4BO15327 924 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 MTX2O75431 263 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 ADPRHP54922 357 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 IFT88Q13099 833 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 PPP1R3AQ16821 1122 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 CDKL4Q5MAI5 379 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 PNCKQ6P2M8 343 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 SBSNQ6UWP8 590 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 TRPM8Q7Z2W7 1104 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 PELI3Q8N2H9 469 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 NAT14Q8WUY8 206 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 ASZ1Q8WWH4 475 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 EXT2Q93063 718 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 PHF21BQ96EK2 531 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 THOC1Q96FV9 657 aaKnown RBP20.17■□□□□ 0.82
SMCO4-203ENST00000526869 HIC2Q96JB3 615 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 MRGPRX1Q96LB2 322 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 CCM2Q9BSQ5 444 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 C1QTNF7Q9BXJ2 289 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 TMEM120AQ9BXJ8 343 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 WWP1Q9H0M0 922 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 GSTO2Q9H4Y5 243 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 RDH14Q9HBH5 336 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 MBD1Q9UIS9 605 aaPredicted RBP20.17■□□□□ 0.82
SMCO4-203ENST00000526869 ZFR2Q9UPR6 939 aaKnown RBP20.17■□□□□ 0.82
SMCO4-203ENST00000526869 OARD1Q9Y530 152 aa20.17■□□□□ 0.82
SMCO4-203ENST00000526869 MYO10Q9HD67 2058 aa20.16■□□□□ 0.82
SMCO4-203ENST00000526869 A0A0G2JND7 137 aa20.16■□□□□ 0.82
SMCO4-203ENST00000526869 CHURC1-FNTBB4DL54 471 aa20.16■□□□□ 0.82
SMCO4-203ENST00000526869 RAD51BO15315 384 aa20.16■□□□□ 0.82
SMCO4-203ENST00000526869 SLC16A5O15375 505 aa20.16■□□□□ 0.82
SMCO4-203ENST00000526869 GPC4O75487 556 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms