RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ZNF671Q8TAW3 534 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CAPSLQ8WWF8 208 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 PKP2Q99959 881 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 AARSD1Q9BTE6 412 aaKnown RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 C1QTNF7Q9BXJ2 289 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CLEC4MQ9H2X3 399 aaPredicted RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ZBTB26Q9HCK0 441 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 RASSF1Q9NS23 344 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 BCKDKO14874 412 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CLDN9O95484 217 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 PITRM1Q5JRX3 1037 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 OGFRL1Q5TC84 451 aaPredicted RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ST13P5Q8NFI4 369 aaPredicted RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ARL5CA6NH57 179 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 SNPHO15079 494 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 TNFRSF21O75509 655 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 SCELO95171 688 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ANGPTL1O95841 491 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PROZP22891 400 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 CCL23P55773 120 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PAFAH1B3Q15102 231 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 FAM182AQ5T1J6 154 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ZBTB2Q8N680 514 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PDPRQ8NCN5 879 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 TEFMQ96QE5 360 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 EVLQ9UI08 416 aaPredicted RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ASF1AQ9Y294 204 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PDE4DIPQ5VU43 2346 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ALOX5P09917 674 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 TLX1P31314 330 aaPredicted RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 CTSKP43235 329 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 RPIAP49247 311 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 RABGGTBP53611 331 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PTCHD4Q6ZW05 846 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PACRGLQ8N7B6 248 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF607Q96SK3 696 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PCDHAC1Q9H158 963 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 SH3GLB1Q9Y371 365 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 GABRDO14764 452 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 INSIG1O15503 277 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 RGS10O43665 173 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ERAL1O75616 437 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 DMPKQ09013 629 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 CLEC20AQ6ZU45 233 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 OR52L1Q8NGH7 329 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 FNDC11Q9BVV2 318 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 CNTN3Q9P232 1028 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 A0A1B0GVM2 712 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 TCAF2A6NFQ2 919 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 DENRO43583 198 aaKnown RBP13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ESR1P03372 595 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 GABRR2P28476 465 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 GPAT3Q53EU6 434 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 CCNYL2Q5T2Q4 361 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 UXS1Q8NBZ7 420 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 HAPLN3Q96S86 360 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 MIOSQ9NXC5 875 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 ZDHHC2Q9UIJ5 367 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 SSR3Q9UNL2 185 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 PSAT1Q9Y617 370 aa13.67□□□□□ -0.22
SYNPO-205ENST00000522122 MATN2O00339 956 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 RGS20O76081 388 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 PRAMEF1O95521 474 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 SPAM1P38567 509 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 RFTN1Q14699 578 aaPredicted RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 CTC1Q2NKJ3 1217 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ANKRD23Q86SG2 305 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 CPNE9Q8IYJ1 553 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 PCYT2Q99447 389 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 GPR22Q99680 433 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 PIGVQ9NUD9 493 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 EIF2B4Q9UI10 523 aaKnown RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 MFHAS1Q9Y4C4 1052 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 FADS2O95864 444 aaKnown RBP13.66□□□□□ -0.22
SYNPO-205ENST00000522122 NCK1P16333 377 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ASMTP46597 345 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 HCAR3P49019 387 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 CDH4P55283 916 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 GTF2H2Q13888 395 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ZDHHC20Q5W0Z9 365 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 GTF2H2CQ6P1K8 395 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 SERPINA13PQ6UXR4 307 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 C16orf62Q7Z3J2 963 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 KLHL23Q8NBE8 558 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 CHID1Q9BWS9 393 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 NMUR1Q9HB89 426 aa13.66□□□□□ -0.22
SYNPO-205ENST00000522122 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms