RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 API5Q9BZZ5 524 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 FOXQ1Q9C009 403 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 ATP13A3Q9H7F0 1226 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 MED20Q9H944 212 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 UPF2Q9HAU5 1272 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 TRPC7Q9HCX4 862 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 FBXO34Q9NWN3 711 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 TRNAU1APQ9NX07 287 aaKnown RBP6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 CD300AQ9UGN4 299 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 GDF2Q9UK05 429 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZBTB1Q9Y2K1 713 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAB21L2Q9Y586 359 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 ACTL7AQ9Y615 435 aa6.22□□□□□ -1.41
TRAPPC11-209ENST00000512476 STRCP1A6NGW2 1772 aa6.21□□□□□ -1.41
TRAPPC11-209ENST00000512476 COL3A1P02461 1466 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 A0A0B4J293 547 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LOC102723971A0A1B0GUV8 181 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LOC105371267A0A1B0GV96 52 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 FAM230AA0A1W2PPH8 454 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 OR2W5A6NFC9 320 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 PSMD11O00231 422 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 NFIBO00712 420 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 AP5Z1O43299 807 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 UGT2B4P06133 528 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 C8AP07357 584 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 BMP2P12643 396 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SMPD1P17405 629 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 MAPKAPK2P49137 400 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ENPEPQ07075 957 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ATP1A4Q13733 1029 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ARHGEF7Q14155 803 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 DMC1Q14565 340 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 PDK4Q16654 411 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC36A3Q495N2 470 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 BTBD8Q5XKL5 378 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LRRC66Q68CR7 880 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 TMEM211Q6ICI0 200 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 DENND1BQ6P3S1 775 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 CLEC9AQ6UXN8 241 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LRRC70Q7Z2Q7 622 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC46A3Q7Z3Q1 461 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 AQP12AQ8IXF9 295 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ADGRF4Q8IZF3 695 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SIRT6Q8N6T7 355 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 RNF169Q8NCN4 708 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 OR56B1Q8NGI3 324 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 POMGNT1Q8WZA1 660 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LPGAT1Q92604 370 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ESAMQ96AP7 390 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 AP2M1Q96CW1 435 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 TBC1D32Q96NH3 1257 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SIGLEC11Q96RL6 698 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 C11orf70Q9BRQ4 267 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SHCBP1LQ9BZQ2 653 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDT1Q9H211 546 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 EPHX3Q9H6B9 360 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 AKIRIN1Q9H9L7 192 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 FARSBQ9NSD9 589 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 HIF1ANQ9NWT6 349 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LARSQ9P2J5 1176 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 DCDC2Q9UHG0 476 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 GGA1Q9UJY5 639 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 TCRBV21S2A2A0A5A6 115 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 GOLGA8JA6NMD2 632 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 GOLGA8TH3BQL2 631 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SORBS2O94875 1100 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 HLA-DRAP01903 254 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZNF888P0CJ79 500 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 GOLGA8HP0CJ92 632 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 PNPLA4P41247 253 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 PTPN9P43378 593 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC6A11P48066 632 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 BCAP31P51572 246 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 CLCN3P51790 818 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 RPL11P62913 178 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SIGLEC14Q08ET2 396 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 NONOQ15233 471 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ZIK1Q3SY52 487 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 C6orf136Q5SQH8 315 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 AFMIDQ63HM1 303 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 HIST2H2BCQ6DN03 193 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 HIST2H2BDQ6DRA6 164 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 DPP8Q6V1X1 898 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SPARTQ8N0X7 666 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 LILRA2Q8N149 483 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 ANKRD13CQ8N6S4 541 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 RAB3IL1Q8TBN0 382 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 RNF141Q8WVD5 230 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 FIG4Q92562 907 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 C4orf36Q96KX1 117 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 TMEM68Q96MH6 324 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 OR2A14Q96R47 310 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 HDAC8Q9BY41 377 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 XYLT2Q9H1B5 865 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 RAD21L1Q9H4I0 556 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 CALHM2Q9HA72 323 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 PNPLA3Q9NST1 481 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 SPG21Q9NZD8 308 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms