RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 ADGRG1Q9Y653 693 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 HRNRQ86YZ3 2850 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 PHF3Q92576 2039 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 CCDC66A2RUB6 948 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 SLC9B1P1A6NJY1 282 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 PDZK1P1A8MUH7 402 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 P4HA2O15460 535 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 PRAMEF2O60811 474 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 ALOX12BO75342 701 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 LCA5LO95447 670 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 F12P00748 615 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 UMODP07911 640 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 HBQ1P09105 142 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 MSL3P1P0C860 447 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 UNGP13051 313 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 BRAFP15056 766 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 CYP2A7P20853 494 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 MSX1P28360 303 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 SPAM1P38567 509 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 TNFSF10P50591 281 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 DGKQP52824 942 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 ARG2P78540 354 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 PPP2R2BQ00005 443 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 TFF3Q07654 80 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 CETN1Q12798 172 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 FAM102AQ5T9C2 384 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 MLIPQ5VWP3 458 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 RESP18Q5W5W9 173 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 LINC00696Q6ZRV3 163 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 CCDC47Q96A33 483 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 CXorf40BQ96DE9 158 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 SCRN2Q96FV2 425 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 CINPQ9BW66 212 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 UPF2Q9HAU5 1272 aaKnown RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 SLC24A3Q9HC58 644 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 PLCB1Q9NQ66 1216 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 GPATCH2LQ9NWQ4 482 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 SOHLH2Q9NX45 425 aa7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
DEPDC1B-205ENST00000512078 OR5K3A6NET4 321 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 OR52A4PA6NMU1 304 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 TMEM150CB9EJG8 249 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 CNOT3O75175 753 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 CTAG2O75638 210 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 PALMO75781 387 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 MTA2O94776 668 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 KLHL18O94889 574 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 ZNF202O95125 648 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 RASAL1O95294 804 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 YEATS4O95619 227 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 HOXD4P09016 255 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 HOXC12P31275 282 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 SCNN1BP51168 640 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 DMPKQ09013 629 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 MYBPHQ13203 477 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 SEPT7Q16181 437 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 RAB6CQ53S08 254 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 AGAP9Q5VTM2 703 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 LRRC66Q68CR7 880 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 MRPL14Q6P1L8 145 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 WASH2PQ6VEQ5 465 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 ARCQ7LC44 396 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 KRTAP1-3Q8IUG1 177 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 SPPL2CQ8IUH8 684 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 TTC30BQ8N4P2 665 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 ACRBPQ8NEB7 543 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 THAP3Q8WTV1 239 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 TEKT4Q8WW24 435 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 RMND5BQ96G75 393 aaPredicted RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 DMRTA2Q96SC8 542 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 RIOK2Q9BVS4 552 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 TLR10Q9BXR5 811 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 POLDIP3Q9BY77 421 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 SLC7A5P2Q9GIP4 190 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 RAB6CQ9H0N0 254 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 LRRC19Q9H756 370 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 STMN3Q9NZ72 180 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 COQ3Q9NZJ6 369 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 NDOR1Q9UHB4 597 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 TMEM59LQ9UK28 342 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 PPIL1Q9Y3C6 166 aa7.49□□□□□ -1.21
DEPDC1B-205ENST00000512078 DYTNA2CJ06 578 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 BECN2A8MW95 431 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 INAFM1C9JVW0 142 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 E7EQ34 232 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 E9PLN8 166 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 VEGFDO43915 354 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 ZRANB2O95218 330 aaKnown RBP eCLIP7.48□□□□□ -1.213e-7■■■□□ 17.7
DEPDC1B-205ENST00000512078 ZNF30P17039 623 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 MMP11P24347 488 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 EPHB2P29323 1055 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 GABRB2P47870 512 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 ATP11AP98196 1134 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 PTSQ03393 145 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 CACNG1Q06432 222 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 RFTN1Q14699 578 aaPredicted RBP7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 PTPRRQ15256 657 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 RABEP1Q15276 862 aa7.48□□□□□ -1.21
DEPDC1B-205ENST00000512078 DEFB113Q30KQ7 82 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms