RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 UNC5BQ8IZJ1 945 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 CACNA2D3Q8IZS8 1091 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 LILRA3Q8N6C8 439 aaPredicted RBP13.08□□□□□ -0.32
SDHA-210ENST00000509420 BEND7Q8N7W2 519 aaPredicted RBP13.08□□□□□ -0.32
SDHA-210ENST00000509420 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.08□□□□□ -0.32
SDHA-210ENST00000509420 ASPSCR1Q9BZE9 553 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 ZNF768Q9H5H4 540 aaKnown RBP13.08□□□□□ -0.32
SDHA-210ENST00000509420 POT1Q9NUX5 634 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 HACD3Q9P035 362 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 AKAP7Q9P0M2 348 aaPredicted RBP13.08□□□□□ -0.32
SDHA-210ENST00000509420 EPHA6Q9UF33 1036 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 FKBPLQ9UIM3 349 aa13.08□□□□□ -0.32
SDHA-210ENST00000509420 R3HDM2Q9Y2K5 976 aaKnown RBP13.08□□□□□ -0.32
SDHA-210ENST00000509420 PRRC2CQ9Y520 2896 aaKnown RBP13.07□□□□□ -0.32
SDHA-210ENST00000509420 LRRK2Q5S007 2527 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 NBASA2RRP1 2371 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 TCRBV7S2A1N4TA0A589 114 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
SDHA-210ENST00000509420 POP7O75817 140 aaKnown RBP13.07□□□□□ -0.32
SDHA-210ENST00000509420 STK17BO94768 372 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 CYLC1P35663 651 aaPredicted RBP13.07□□□□□ -0.32
SDHA-210ENST00000509420 NFKB2Q00653 900 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 RPE65Q16518 533 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 ODF2Q5BJF6 829 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 METRNLQ641Q3 311 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 DUS1LQ6P1R4 473 aaKnown RBP13.07□□□□□ -0.32
SDHA-210ENST00000509420 CERS6Q6ZMG9 384 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 OR4K2Q8NGD2 314 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 OR13C4Q8NGS5 318 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 CCDC110Q8TBZ0 833 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 KLHL6Q8WZ60 621 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 SPATA13Q96N96 652 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 TGM7Q96PF1 710 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 TEFMQ96QE5 360 aaKnown RBP13.07□□□□□ -0.32
SDHA-210ENST00000509420 NRTNQ99748 197 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 RAB33BQ9H082 229 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 ARNT2Q9HBZ2 717 aa13.07□□□□□ -0.32
SDHA-210ENST00000509420 PIKFYVEQ9Y2I7 2098 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 IGHV5-51A0A0C4DH38 117 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 H7C0C1 242 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 CCL22O00626 93 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 TOX3O15405 576 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 NKX2-8O15522 239 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 LDB2O43679 373 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 PPFIA2O75334 1257 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 TIAF1O95411 115 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 PRAMEF1O95521 474 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 VIPP01282 170 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 RBP3P10745 1247 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 IDSP22304 550 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 STAT5AP42229 794 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 ATP5OP48047 213 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 CDKN1CP49918 316 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 VAV2P52735 878 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 GEMP55040 296 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 GDF10P55107 478 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 EIF3EP60228 445 aaKnown RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 SPA17Q15506 151 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 LDLRAP1Q5SW96 308 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 CCDC70Q6NSX1 233 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 TMEM220Q6QAJ8 160 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 AMZ2Q86W34 360 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 PLXDC1Q8IUK5 500 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 AVL9Q8NBF6 648 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 CCDC112Q8NEF3 446 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 BRSK1Q8TDC3 778 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 SLC45A3Q96JT2 553 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 SLC41A2Q96JW4 573 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 INSM2Q96T92 566 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 WDR70Q9NW82 654 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 PACSIN2Q9UNF0 486 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 PSMD13Q9UNM6 376 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 PCDHB11Q9Y5F2 797 aa13.06□□□□□ -0.32
SDHA-210ENST00000509420 USP9XQ93008 2570 aaPredicted RBP13.06□□□□□ -0.32
SDHA-210ENST00000509420 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
SDHA-210ENST00000509420 IGLV3-16A0A075B6K0 115 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 TRBV5-4A0A0C4DH59 114 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 KCNN4O15554 427 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 ANXA9O76027 345 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 SRP72O76094 671 aaKnown RBP13.05□□□□□ -0.32
SDHA-210ENST00000509420 METTL18O95568 372 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 SPTBP11277 2137 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 PSMA3P25788 255 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 OAS2P29728 719 aaKnown RBP13.05□□□□□ -0.32
SDHA-210ENST00000509420 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 LAMB3Q13751 1172 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 SPARCL1Q14515 664 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 BCL7AQ4VC05 210 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 ATP1A1-AS1Q5TC04 95 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
SDHA-210ENST00000509420 CEACAM20Q6UY09 585 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms