RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KRT3P12035 628 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 MYL4P12829 197 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ETS2P15036 469 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 EPHA3P29320 983 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CCKARP32238 428 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CBSP35520 551 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 FDFT1P37268 417 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 UBA7P41226 1012 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PRCPP42785 496 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC1A4P43007 532 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HSD17B4P51659 736 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PLTPP55058 493 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 VCPP55072 806 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HADHBP55084 474 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 GNG2P59768 71 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HTRA4P83105 476 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CDK16Q00536 496 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 POU5F1Q01860 360 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 KLHL30Q0D2K2 578 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 APOFQ13790 326 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CYTH1Q15438 398 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 MAPRE2Q15555 327 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ASIC2Q16515 512 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PHKG1Q16816 387 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 NADK2Q4G0N4 442 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 C4orf46Q504U0 113 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PPP6R3Q5H9R7 873 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 EFHC1Q5JVL4 640 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 TMTC4Q5T4D3 741 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SEL1L2Q5TEA6 688 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 C1orf146Q5VVC0 180 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SIGIRRQ6IA17 410 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SPOPLQ6IQ16 392 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF530Q6P9A1 599 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 B3GNT9Q6UX72 402 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 H2AFVQ71UI9 128 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 LPCAT2Q7L5N7 544 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HDDC2Q7Z4H3 204 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 KCTD20Q7Z5Y7 419 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC51BQ86UW2 128 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 TTC30AQ86WT1 665 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 LURAP1LQ8IV03 231 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 TPH2Q8IWU9 490 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC105Q8IYK2 499 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC7A5P1Q8MH63 180 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 TTC30BQ8N4P2 665 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 DEFB123Q8N688 67 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZBTB34Q8NCN2 500 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 OR56A3Q8NH54 315 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 LILRB4Q8NHJ6 448 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 GABPB2Q8TAK5 448 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PNPT1Q8TCS8 783 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 C10orf82Q8WW14 230 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 S100ZQ8WXG8 99 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ART4Q93070 314 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SDCCAG3Q96C92 435 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HES6Q96HZ4 224 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZBTB45Q96K62 511 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 AIFM3Q96NN9 605 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PPP1R10Q96QC0 940 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 KCNK16Q96T55 309 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PSMB7Q99436 277 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SERPINI1Q99574 410 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 MYD88Q99836 296 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 UQCC2Q9BRT2 126 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 VN1R3Q9BXE9 311 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 LRRC2Q9BYS8 371 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 WDR12Q9GZL7 423 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 WWP1Q9H0M0 922 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HIPK3Q9H422 1215 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 RNF41Q9H4P4 317 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 RMND5AQ9H871 391 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF304Q9HCX3 659 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 S100A14Q9HCY8 104 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 HMG20AQ9NP66 347 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 MRPL40Q9NQ50 206 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SNX15Q9NRS6 342 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 DDX18Q9NVP1 670 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 MCM9Q9NXL9 1143 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 TAS2R1Q9NYW7 299 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 TMOD2Q9NZR1 351 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 DNMT3BQ9UBC3 853 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SLC24A2Q9UI40 661 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 APPL1Q9UKG1 709 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 LZTS1Q9Y250 596 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 WBP11Q9Y2W2 641 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 DTNAQ9Y4J8 743 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 MYH1P12882 1939 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ANKRD31Q8N7Z5 1873 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 COL4A5P29400 1685 aa4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 GAKO14976 1311 aa4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 SF3B1O75533 1304 aaKnown RBP eCLIP4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 MYH2Q9UKX2 1941 aa4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 A0A087WXM4 84 aa4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 CCDC187A0A096LP49 1063 aa4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 PI4KAP2A4QPH2 592 aa4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 PABPN1LA6NDY0 278 aaKnown RBP4.57□□□□□ -1.68
PDLIM5-211ENST00000508531 EIF4E1BA6NMX2 242 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms