RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ELF1P32519 619 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 VEGFCP49767 419 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 MLLT10P55197 1068 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 KIR2DS3Q14952 304 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 TECRLQ5HYJ1 363 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 TSPAN33Q86UF1 283 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 ARHGAP12Q8IWW6 846 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 RNF168Q8IYW5 571 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 STPG4Q8N801 248 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 PCYOX1LQ8NBM8 494 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 TRIM58Q8NG06 486 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 SGCDQ92629 289 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 BARHL1Q9BZE3 327 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 PDCL3Q9H2J4 239 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 TRPC7Q9HCX4 862 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 KIDINS220Q9ULH0 1771 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 KIF14Q15058 1648 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 A0A0G2JNG1 304 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 FAM237BA0A1B0GVD1 139 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 MAP2K7O14733 419 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 PCDH7O60245 1069 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 DAB1O75553 588 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 RTN3O95197 1032 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 ALDH4A1P30038 563 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 RPS3AP61247 264 aaKnown RBP4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 ERVK11-1P61568 191 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 MBTD1Q05BQ5 628 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 NIPAL4Q0D2K0 466 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 KIR2DS5Q14953 304 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 APLFQ8IW19 511 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 EXOC8Q8IYI6 725 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 EMC1Q8N766 993 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 FRMD1Q8N878 549 aa4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 OXNAD1Q96HP4 312 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 NPHP4O75161 1426 aaPredicted RBP4.89□□□□□ -1.63
TOPBP1-206ENST00000508524 MED14O60244 1454 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 PRXQ9BXM0 1461 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 PLEKHD1A6NEE1 506 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 BUD23O43709 281 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 NDUFS3O75489 264 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 TMEM63AO94886 807 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 ERVK-10P10266 1014 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 NR2F2P24468 414 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 GOLGA8DPQ0D2H9 430 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 ZC2HC1CQ53FD0 456 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 TRPT1Q86TN4 253 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 GBGT1Q8N5D6 347 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 SLC5A8Q8N695 610 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 NAXEQ8NCW5 288 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 CTCFLQ8NI51 663 aaPredicted RBP4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 TAF15Q92804 592 aaKnown RBP eCLIP4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 PPM1MQ96MI6 270 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 SEMA3CQ99985 751 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 FSD1Q9BTV5 496 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 TMEM39BQ9GZU3 492 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 EPB41L5Q9HCM4 733 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 SLC52A3Q9NQ40 469 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 ACAD8Q9UKU7 415 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 R3HDM2Q9Y2K5 976 aaKnown RBP4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 RGS12O14924 1447 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 FAM135BQ49AJ0 1406 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 NOTCH3Q9UM47 2321 aa4.88□□□□□ -1.63
TOPBP1-206ENST00000508524 ABCC1P33527 1531 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 SYNMO15061 1565 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 ROBO1Q9Y6N7 1651 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 KIAA1210Q9ULL0 1709 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 H3BQ06 376 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 PLPP2O43688 288 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 CIDEAO60543 219 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 TSHBP01222 138 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 ACADLP28330 430 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 NR2C2P49116 596 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 GNB1P62873 340 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 PMP22Q01453 160 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 G3BP1Q13283 466 aaKnown RBP eCLIP4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 NAB2Q15742 525 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 RBMS3Q6XE24 437 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 GLDNQ6ZMI3 551 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 LONP2Q86WA8 852 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 GCSAMQ8N6F7 178 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 OR8K5Q8NH50 307 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 GFI1Q99684 422 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 SLX1AQ9BQ83 275 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 B3GALT5Q9Y2C3 310 aa4.87□□□□□ -1.63
TOPBP1-206ENST00000508524 MYO5CQ9NQX4 1742 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 NPHP1O15259 732 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 CCNDBP1O95273 360 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 EIF2S1P05198 315 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 TFAP2AP05549 437 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 ZNF883P0CG24 379 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 PRSS56P0CW18 603 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 SELLP14151 372 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 MSH3P20585 1137 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 HRH2P25021 359 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 HOXC8P31273 242 aa4.86□□□□□ -1.63
TOPBP1-206ENST00000508524 CTSCP53634 463 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms