RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ARMC1Q9NVT9 282 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 DMAC2Q9NW81 257 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 KLK14Q9P0G3 267 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 EBF1Q9UH73 591 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNRF3Q9ULT6 936 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 POFUT2Q9Y2G5 429 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 PCDHGB3Q9Y5G1 929 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 ALG5Q9Y673 324 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 MYOM1P52179 1685 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 MROH1Q8NDA8 1641 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 KRBA1A5PL33 1030 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 ANKDD1BA6NHY2 528 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 QSOX1O00391 747 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 CHP2O43745 196 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 PRMT3O60678 531 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 OR6A2O95222 327 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 SERPINA3P01011 423 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 PRKAR2AP13861 404 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 VEGFAP15692 232 aaPredicted RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 S100A2P29034 98 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 EIF2B5Q13144 721 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 HNRNPDQ14103 355 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 BOP1Q14137 746 aaKnown RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 DPY19L1Q2PZI1 675 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 SLC25A52Q3SY17 297 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 PITRM1Q5JRX3 1037 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 SNAP47Q5SQN1 464 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 ARMC12Q5T9G4 340 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 SLC27A1Q6PCB7 646 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 HAGHLQ6PII5 290 aaPredicted RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 CHST15Q7LFX5 561 aaPredicted RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 TOMM5Q8N4H5 51 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF641Q96N77 438 aaPredicted RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 VPS51Q9UID3 782 aa7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF490Q9ULM2 529 aaPredicted RBP7.24□□□□□ -1.25
UBE2D3-224ENST00000508474 SPATA31A6Q5VVP1 1343 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 MROH2AA6NES4 1674 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 CHURC1-FNTBB4DL54 471 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 B8ZZF3 427 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 THP07101 528 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 MMP10P09238 476 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 MTHFD1P11586 935 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 IL1R1P14778 569 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 EPORP19235 508 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 IMPDH1P20839 514 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PRKCHP24723 683 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 RORAP35398 523 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 CCR10P46092 362 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ARSFP54793 590 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 WNT3AP56704 352 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF234Q14588 700 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ANKRD26P1Q6NSI1 321 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PNCKQ6P2M8 343 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 CYP20A1Q6UW02 462 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 USP45Q70EL2 814 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 TFAP2DQ7Z6R9 452 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ADGRD2Q7Z7M1 963 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 OOSP2Q86WS3 158 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 IQCF2Q8IXL9 164 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 GPALPP1Q8IXQ4 340 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PHTF2Q8N3S3 785 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 SLC15A4Q8N697 577 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 BPIFB1Q8TDL5 484 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 DNAJA4Q8WW22 397 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 HYLS1Q96M11 299 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 HAPLN3Q96S86 360 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 S100A13Q99584 98 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 MGME1Q9BQP7 344 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 FDXACB1Q9BRP7 624 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 CCM2LQ9NUG4 571 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 TCAF1Q9Y4C2 921 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ERCC6L2Q5T890 1561 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 C10orf71Q711Q0 1435 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 RPP40O75818 363 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 LPOP22079 712 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ECHS1P30084 290 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PTPN9P43378 593 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 GSK3BP49841 420 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 GDF10P55107 478 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 TMEM62Q0P6H9 643 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 RPA4Q13156 261 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ZNF438Q7Z4V0 828 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 LILRB4Q8NHJ6 448 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 CEP76Q8TAP6 659 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ACER1Q8TDN7 264 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 DENND1AQ8TEH3 1009 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PPCDCQ96CD2 204 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PAK1IP1Q9NWT1 392 aaPredicted RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 ANKMY1Q9P2S6 941 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 PCDHB1Q9Y5F3 818 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 INMT-MINDY4F8WBC2 141 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 TRBC1P01850 177 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 FPR1P21462 350 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 OAZ1P54368 228 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 CSTF1Q05048 431 aaKnown RBP7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 KCNJ11Q14654 390 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 LCLAT1Q6UWP7 414 aa7.23□□□□□ -1.25
UBE2D3-224ENST00000508474 BEND5Q7L4P6 421 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms