RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CDH22Q9UJ99 828 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 SLC22A14Q9Y267 594 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 BTBD3Q9Y2F9 522 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 RAD54BQ9Y620 910 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 WRBO00258 174 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 HS6ST1O60243 411 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 MBD3O95983 291 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 UGT2B4P06133 528 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 CYP2C8P10632 490 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 ENDOUP21128 410 aaKnown RBP5.17□□□□□ -1.58
NIPBL-204ENST00000504430 CCND2P30279 289 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 CAPGP40121 348 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 HNRNPFP52597 415 aaKnown RBP5.17□□□□□ -1.58
NIPBL-204ENST00000504430 CORO7P57737 925 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 TPM4P67936 248 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 ZP2Q05996 745 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 HHATQ5VTY9 493 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 LRRC8EQ6NSJ5 796 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 SYCE1Q8N0S2 351 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 FUKQ8N0W3 1084 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 ZNF596Q8TC21 504 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 THOC1Q96FV9 657 aaKnown RBP5.17□□□□□ -1.58
NIPBL-204ENST00000504430 RBM41Q96IZ5 413 aaKnown RBP5.17□□□□□ -1.58
NIPBL-204ENST00000504430 TKTL2Q9H0I9 626 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 XYLT2Q9H1B5 865 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 PDZD7Q9H5P4 517 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 PSTPIP2Q9H939 334 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 RDH8Q9NYR8 311 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 MOCS1Q9NZB8 636 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 SPG21Q9NZD8 308 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 ABI3Q9P2A4 366 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 ONECUT1Q9UBC0 465 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 TMEM59LQ9UK28 342 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 CROTQ9UKG9 612 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 SUFUQ9UMX1 484 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 PACSIN2Q9UNF0 486 aaPredicted RBP5.17□□□□□ -1.58
NIPBL-204ENST00000504430 MFHAS1Q9Y4C4 1052 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 PCDHGB1Q9Y5G3 927 aa5.17□□□□□ -1.58
NIPBL-204ENST00000504430 C1orf226A1L170 272 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 K7ERQ8 282 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 MAP2K7O14733 419 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 OGTO15294 1046 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TOMM70O94826 608 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 U2AF2P26368 475 aaKnown RBP eCLIP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PSMB4P28070 264 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 KIR2DL3P43628 341 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SMCPP49901 116 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 BST1Q10588 318 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 UBXN2BQ14CS0 331 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SNAPC1Q16533 368 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PHYHD1Q5SRE7 291 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PMS2CLQ68D20 193 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 FBXO46Q6PJ61 603 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TICAM1Q8IUC6 712 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 CFAP52Q8N1V2 620 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ZBTB2Q8N680 514 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ASCC1Q8N9N2 400 aaKnown RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 OR56B1Q8NGI3 324 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SCAMP4Q969E2 229 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 MTMR4Q9NYA4 1195 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 GGA2Q9UJY4 613 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SH3TC1Q8TE82 1336 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 A0A0G2JNJ9 132 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 A0A1W2PPW3 197 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TCRBV21S2A2A0A5A6 115 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 OR6C65A6NJZ3 312 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SPATA31D3P0C874 917 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 CALCBP10092 127 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PPP2R1AP30153 589 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 CCND3P30281 292 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 DLSTP36957 453 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TUFMP49411 452 aaKnown RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 BLVRAP53004 296 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 NKX3-2P78367 333 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SHC2P98077 582 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SLAQ13239 276 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TOB2Q14106 344 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 NCF4Q15080 339 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 STK38Q15208 465 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TBC1D25Q3MII6 688 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ATP13A5Q4VNC0 1218 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 DCST1Q5T197 706 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 KRT39Q6A163 491 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SARM1Q6SZW1 724 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SPATA31D4Q6ZUB0 917 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 ADGRD2Q7Z7M1 963 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 DTX3Q8N9I9 347 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 MBD3L2Q8NHZ7 208 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 RAB40AQ8WXH6 277 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 LPIN2Q92539 896 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 NAP1L3Q99457 506 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 SIRPDQ9H106 197 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 EPC1Q9H2F5 836 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PNPLA3Q9NST1 481 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 DBF4Q9UBU7 674 aaPredicted RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 Q9UFV3 132 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 NDRG4Q9ULP0 352 aaKnown RBP5.16□□□□□ -1.58
NIPBL-204ENST00000504430 TARM1B6A8C7 271 aa5.16□□□□□ -1.58
NIPBL-204ENST00000504430 PRRG1O14668 218 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms