RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PLIN3O60664 434 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ITGA10O75578 1167 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 APOL3O95236 402 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PLA2G4BP0C869 781 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CYP2D6P10635 497 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ARNTP27540 789 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GSTM2P28161 218 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ARL1P40616 181 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MYL7Q01449 175 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MERTKQ12866 999 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NFX1Q12986 1120 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GPS1Q13098 491 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 LEXMQ3ZCV2 418 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 VWA5B1Q5TIE3 1220 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NANOGP8Q6NSW7 305 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TXNDC11Q6PKC3 985 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PLET1Q6UQ28 207 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC103Q8IW40 242 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GALNT12Q8IXK2 581 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 POC5Q8NA72 575 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RDH13Q8NBN7 331 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FLCNQ8NFG4 579 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 OR4K1Q8NGD4 311 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 C9orf43Q8TAL5 461 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ELMO2Q96JJ3 720 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 UROC1Q96N76 676 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RPRD1AQ96P16 312 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TCEAL7Q9BRU2 100 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RNF38Q9H0F5 515 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 C2orf40Q9H1Z8 148 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ADNPQ9H2P0 1102 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RPF2Q9H7B2 306 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NOL11Q9H8H0 719 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GTSE1Q9NYZ3 720 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MAT2BQ9NZL9 334 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 DKK4Q9UBT3 224 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TCEAL9Q9UHQ7 104 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MAPRE3Q9UPY8 281 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJC16Q9Y2G8 782 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NR2E1Q9Y466 385 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TCAF1Q9Y4C2 921 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 COPG1Q9Y678 874 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TP53BP1Q12888 1972 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 KRBOX1C9JBD0 128 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TK2O00142 265 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 WRBO00258 174 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PLK4O00444 970 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 EXTL3O43909 919 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 B4GALT3O60512 393 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TULP3O75386 442 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ERN1O75460 977 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ODC1P11926 461 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RFC4P35249 363 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CAPGP40121 348 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MRPS22P82650 360 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MAP2K5Q13163 448 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SELENBP1Q13228 472 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 GPR17Q13304 367 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NOMO1Q15155 1222 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SEL1L3Q68CR1 1132 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CNSTQ6PJW8 725 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NAPRTQ6XQN6 538 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 THAP5Q7Z6K1 395 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PLD3Q8IV08 490 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 FAM9CQ8IZT9 166 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SIX5Q8N196 739 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RHEBL1Q8TAI7 183 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SEMA4DQ92854 862 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MAGEB10Q96LZ2 347 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PHOX2BQ99453 314 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ACBD6Q9BR61 282 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 MYL10Q9BUA6 226 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 PITHD1Q9GZP4 211 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CLEC4MQ9H2X3 399 aaPredicted RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 C12orf65Q9H3J6 166 aaKnown RBP2.76□□□□□ -1.97
NEDD4-204ENST00000503468 RSAD1Q9HA92 442 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 WDR41Q9HAD4 459 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CYP4F11Q9HBI6 524 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 C1orf112Q9NSG2 853 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TOR4AQ9NXH8 423 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 SRRDQ9UH36 339 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 TMCC3Q9ULS5 477 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 KLHL20Q9Y2M5 609 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 NDUFAF1Q9Y375 327 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF451Q9Y4E5 1061 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 CEP290O15078 2479 aa2.76□□□□□ -1.97
NEDD4-204ENST00000503468 H3BMQ9 156 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CHADO15335 359 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CLDN3O15551 220 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 USP1O94782 785 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FCER1AP12319 257 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RAB3AP20336 220 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ENPP1P22413 925 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CYP7A1P22680 504 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RPA3P35244 121 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DDOSTP39656 456 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MVDP53602 400 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CRYBB1P53674 252 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 PRAMEP78395 509 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SCN1BQ07699 218 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms