RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CRYMQ14894 314 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TECRLQ5HYJ1 363 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 RBMS3Q6XE24 437 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TPRG1Q6ZUI0 275 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 FASTKD5Q7L8L6 764 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TRPT1Q86TN4 253 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TICAM1Q8IUC6 712 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 HCAR2Q8TDS4 363 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TAS1R2Q8TE23 839 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 USP6NLQ92738 828 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 ELMOD3Q96FG2 381 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 C17orf77Q96MU5 243 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 SLX1AQ9BQ83 275 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 RBM4Q9BWF3 364 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 PLK3Q9H4B4 646 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 PELI2Q9HAT8 420 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 APOBEC3GQ9HC16 384 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 SLC52A3Q9NQ40 469 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 EIF2B3Q9NR50 452 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 MBNL1Q9NR56 388 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 SETD4Q9NVD3 440 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 RCC2Q9P258 522 aaKnown RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF624Q9P2J8 865 aaPredicted RBP2.32□□□□□ -2.04
SMAD1-203ENST00000502342 TSPYL4Q9UJ04 414 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 LYVE1Q9Y5Y7 322 aa2.32□□□□□ -2.04
SMAD1-203ENST00000502342 OR2M5A3KFT3 312 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 PLK4O00444 970 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 SRPRAP08240 638 aaKnown RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 PATE4P0C8F1 98 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 PRSS56P0CW18 603 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 LAMP2P13473 410 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 CKMT2P17540 419 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MAPK4P31152 587 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MAP2K2P36507 400 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 PSMC4P43686 418 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 NR2C2P49116 596 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 VEGFCP49767 419 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 NR0B1P51843 470 aaKnown RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 KCNJ10P78508 379 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 PLA2G7Q13093 441 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 DDX10Q13206 875 aaKnown RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 PPIGQ13427 754 aaKnown RBP eCLIP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MVPQ14764 893 aaKnown RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 CCDC30Q5VVM6 783 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 C15orf39Q6ZRI6 1047 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF534Q76KX8 674 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MAATS1Q7Z4T9 603 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 TSPAN33Q86UF1 283 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 ARID3BQ8IVW6 561 aaPredicted RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 CEP97Q8IW35 865 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 WDTC1Q8N5D0 677 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 NGEFQ8N5V2 710 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 TRPC4APQ8TEL6 797 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF473Q8WTR7 871 aaKnown RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 SCFD2Q8WU76 684 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM143Q96AN5 459 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 LGALS12Q96DT0 336 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MPP4Q96JB8 637 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 OR2A14Q96R47 310 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 DDOQ99489 341 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 GFI1Q99684 422 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 LITAFQ99732 161 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 C1QTNF1Q9BXJ1 281 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 ITPAQ9BY32 194 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MUC13Q9H3R2 512 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 SMARCAD1Q9H4L7 1026 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 DENND2DQ9H6A0 471 aaPredicted RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 DNAJC18Q9H819 358 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 MIOSQ9NXC5 875 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 OGFRQ9NZT2 677 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 DNAJB4Q9UDY4 337 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 CMAHPQ9Y471 501 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 TMEM184BQ9Y519 407 aaPredicted RBP2.31□□□□□ -2.04
SMAD1-203ENST00000502342 FLT1P17948 1338 aa2.31□□□□□ -2.04
SMAD1-203ENST00000502342 TEX13DA0A0J9YY54 714 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ANTXRLA6NF34 631 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 TPPPO94811 219 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 GH2P01242 217 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 RB1P06400 928 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 TNFAIP3P21580 790 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 CBLP22681 906 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ACADLP28330 430 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 HOXA13P31271 388 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 CDH8P55286 799 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ARF3P61204 181 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 RPS18P62269 152 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ARF1P84077 181 aaKnown RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 PRKAA1Q13131 559 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 KRT33BQ14525 404 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 PCGF3Q3KNV8 242 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ZC2HC1CQ53FD0 456 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 SNX30Q5VWJ9 437 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ALS2CLQ60I27 953 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ZNF772Q68DY9 489 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ARHGAP17Q68EM7 881 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 ADALQ6DHV7 355 aa2.3□□□□□ -2.04
SMAD1-203ENST00000502342 KIAA0930Q6ICG6 404 aaPredicted RBP2.3□□□□□ -2.04
SMAD1-203ENST00000502342 KLC3Q6P597 504 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms