RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 HLTFQ14527 1009 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PTPRRQ15256 657 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SYCP1Q15431 976 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CA9Q16790 459 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CLEC16AQ2KHT3 1053 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 TCP11X2Q5H9J9 407 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SNAP47Q5SQN1 464 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SFRP5Q5T4F7 317 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CPZQ66K79 652 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SLC6A19Q695T7 634 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 DNAJC24Q6P3W2 148 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SLC30A9Q6PML9 568 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 LVRNQ6Q4G3 990 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 LIPIQ6XZB0 460 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 MARK2Q7KZI7 788 aaKnown RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 UBE3DQ7Z6J8 389 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF761Q86XN6 746 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 FAM129CQ86XR2 697 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PRIMA1Q86XR5 153 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 ZNF677Q86XU0 584 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 APLFQ8IW19 511 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 MFSD4AQ8N468 514 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 BMPERQ8N8U9 685 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 OR6C4Q8NGE1 309 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SPATA3Q8NHX4 192 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 FNIP1Q8TF40 1166 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CASKIN2Q8WXE0 1202 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CENPIQ92674 756 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 NTAN1Q96AB6 310 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 COX4I2Q96KJ9 171 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 NSMCE3Q96MG7 304 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 RBM15Q96T37 977 aaKnown RBP eCLIP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SLC25A23Q9BV35 468 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CINPQ9BW66 212 aaPredicted RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 ASPSCR1Q9BZE9 553 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 GANQ9H2C0 597 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 DHX35Q9H5Z1 703 aaKnown RBP5.49□□□□□ -1.53
SPTA1-209ENST00000498708 C12orf49Q9H741 205 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CATSPERBQ9H7T0 1116 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 SP110Q9HB58 689 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 APMAPQ9HDC9 416 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM9Q9P0T7 183 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 PCSK1NQ9UHG2 260 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 CD84Q9UIB8 345 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 FZD10Q9ULW2 581 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 MFHAS1Q9Y4C4 1052 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 DOCK4Q8N1I0 1966 aa5.49□□□□□ -1.53
SPTA1-209ENST00000498708 NSD1Q96L73 2696 aaPredicted RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 FER1L5A0AVI2 2057 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 TSPAN11A1L157 253 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PRSS38A1L453 326 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PRAMEF27A3QJZ7 478 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ANKRD62A6NC57 917 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 TMEM200CA6NKL6 621 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 SIGLEC16A6NMB1 481 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 B4E171 279 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 EEF2KO00418 725 aaKnown RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PRAMEF11O60813 436 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 KATNA1O75449 491 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 STK17BO94768 372 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 FUCA1P04066 466 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 FGF1P05230 155 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CALB1P05937 261 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 UNGP13051 313 aaPredicted RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CCNB1P14635 433 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CD1EP15812 388 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 BPIP17213 487 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CTPS1P17812 591 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 GM2AP17900 193 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 KELP23276 732 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 NFKBIAP25963 317 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CD1CP29017 333 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 SERPINA4P29622 427 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CSTF2P33240 577 aaKnown RBP eCLIP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 DLSTP36957 453 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 TSPAN7P41732 249 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 STAT5AP42229 794 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 SSR1P43307 286 aaKnown RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 MAPK9P45984 424 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 LIMK2P53671 638 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ITGA1P56199 1179 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 KIAA1024LP59773 190 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 UBE2HP62256 183 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ETF1P62495 437 aaKnown RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 OGDHQ02218 1023 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 CDK18Q07002 472 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PARP15Q460N3 678 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PLEKHN1Q494U1 663 aaPredicted RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PPP6R3Q5H9R7 873 aaPredicted RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PAPD7Q5XG87 772 aaKnown RBP5.48□□□□□ -1.53
SPTA1-209ENST00000498708 RAET1GQ6H3X3 334 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 PNCKQ6P2M8 343 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 DCUN1D2Q6PH85 259 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ARCQ7LC44 396 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 TRIM74Q86UV6 250 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 NRROSQ86YC3 692 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 UMODL1-AS1Q8N2C9 162 aa5.48□□□□□ -1.53
SPTA1-209ENST00000498708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms