RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CAPZBP47756 277 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 MAP7Q14244 749 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 SIRPB2Q5JXA9 342 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 AGAP9Q5VTM2 703 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 FAM83HQ6ZRV2 1179 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-209ENST00000498058 FAM92BQ6ZTR7 304 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 RHOT1Q8IXI2 618 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 SLC25A41Q8N5S1 370 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 ESX1Q8N693 406 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 RASGEF1AQ8N9B8 481 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 GALNT6Q8NCL4 622 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 KLHL6Q8WZ60 621 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 ULBP3Q9BZM4 244 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 LACRTQ9GZZ8 138 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 TRIT1Q9H3H1 467 aaKnown RBP18.19■□□□□ 0.5
PRKCB-209ENST00000498058 POT1Q9NUX5 634 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 IL17CQ9P0M4 197 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 CROTQ9UKG9 612 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 PYCARDQ9ULZ3 195 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 RCCD1A6NED2 376 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 CST8O60676 142 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 KIAA0754O94854 1291 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 TIAF1O95411 115 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 TCN2P20062 427 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 IDSP22304 550 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 DEKP35659 375 aaKnown RBP18.18■□□□□ 0.5
PRKCB-209ENST00000498058 PTPRCAPQ14761 206 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 CHRNA6Q15825 494 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 IGFBP7Q16270 282 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 SPOCD1Q6ZMY3 1216 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 PRSS42Q7Z5A4 293 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 TRAPPC5Q8IUR0 188 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 ZNF567Q8N184 647 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 NAT14Q8WUY8 206 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 TFB1MQ8WVM0 346 aaKnown RBP18.18■□□□□ 0.5
PRKCB-209ENST00000498058 ABHD17AQ96GS6 310 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 EFHD1Q9BUP0 239 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 LZTFL1Q9NQ48 299 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 DDX56Q9NY93 547 aaKnown RBP18.18■□□□□ 0.5
PRKCB-209ENST00000498058 FAM153AQ9UHL3 310 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 GUCA1BQ9UMX6 200 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 FLNCQ14315 2725 aa18.18■□□□□ 0.5
PRKCB-209ENST00000498058 RELNP78509 3460 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 MACROD2A1Z1Q3 448 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 TOX3O15405 576 aaPredicted RBP18.17■□□□□ 0.5
PRKCB-209ENST00000498058 NR1D1P20393 614 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 DLSTP36957 453 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 SLC1A1P43005 524 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 MARCKSL1P49006 195 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 CACHD1Q5VU97 1274 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 KAZNQ674X7 775 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 C6orf15Q6UXA7 325 aaPredicted RBP18.17■□□□□ 0.5
PRKCB-209ENST00000498058 FAM151BQ6UXP7 276 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 CERS6Q6ZMG9 384 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 C9orf43Q8TAL5 461 aaPredicted RBP18.17■□□□□ 0.5
PRKCB-209ENST00000498058 GDAP1Q8TB36 358 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 HAUS1Q96CS2 278 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 CXorf40BQ96DE9 158 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 ALS2CR12Q96Q35 445 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 GORASP1Q9BQQ3 440 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 C10orf88Q9H8K7 445 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 EPHA6Q9UF33 1036 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 TFR2Q9UP52 801 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 MAST4O15021 2626 aa18.17■□□□□ 0.5
PRKCB-209ENST00000498058 IGHV5-51A0A0C4DH38 117 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 SPAG6O75602 509 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 POP7O75817 140 aaKnown RBP18.16■□□□□ 0.5
PRKCB-209ENST00000498058 RASSF9O75901 435 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 FGF5P12034 268 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 NR2C2P49116 596 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 NFE2L1Q14494 772 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 KCNAB1Q14722 419 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 RPE65Q16518 533 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 CRTC2Q53ET0 693 aaPredicted RBP18.16■□□□□ 0.5
PRKCB-209ENST00000498058 CCDC70Q6NSX1 233 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 IRGCQ6NXR0 463 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 ZC3H18Q86VM9 953 aaKnown RBP18.16■□□□□ 0.5
PRKCB-209ENST00000498058 SYCE1Q8N0S2 351 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 APOBEC4Q8WW27 367 aaKnown RBP18.16■□□□□ 0.5
PRKCB-209ENST00000498058 FCRL5Q96RD9 977 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 RUFY1Q96T51 708 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 AKIRIN1Q9H9L7 192 aaPredicted RBP18.16■□□□□ 0.5
PRKCB-209ENST00000498058 KCND1Q9NSA2 647 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 SEMA5BQ9P283 1151 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 PSMD13Q9UNM6 376 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 KCNMB2Q9Y691 235 aa18.16■□□□□ 0.5
PRKCB-209ENST00000498058 SPENQ96T58 3664 aaKnown RBP18.15■□□□□ 0.5
PRKCB-209ENST00000498058 hCG_1818297A0A087WSY0 165 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 SPOPO43791 374 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 FOLR1P15328 257 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 NELFEP18615 380 aaKnown RBP18.15■□□□□ 0.5
PRKCB-209ENST00000498058 MSNP26038 577 aaKnown RBP18.15■□□□□ 0.5
PRKCB-209ENST00000498058 SPAM1P38567 509 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 CASRP41180 1078 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 DMPKQ09013 629 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 ERV3-1Q14264 604 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 IL11RAQ14626 422 aa18.15■□□□□ 0.5
PRKCB-209ENST00000498058 SLC1A5Q15758 541 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms