RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	SNRPA	P09012	282 aa	Known RBP	13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SAT1	P21673	171 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FDXR	P22570	491 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CSRP3	P50461	194 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CDKN2D	P55273	166 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TAS2R39	P59534	338 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SRP54	P61011	504 aa	Known RBP	13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	POU4F1	Q01851	419 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LPAL2	Q16609	132 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ALG11	Q2TAA5	492 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PYCR3	Q53H96	274 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TTMP	Q5BVD1	217 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CRTC3	Q6UUV7	619 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PARG	Q86W56	976 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TRAPPC5	Q8IUR0	188 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CNPY4	Q8N129	248 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TSACC	Q96A04	125 aa	Predicted RBP	13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ISL2	Q96A47	359 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PANX3	Q96QZ0	392 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SH3GL2	Q99962	352 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CAB39L	Q9H9S4	337 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CYP4F12	Q9HCS2	524 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MED4	Q9NPJ6	270 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	LATS2	Q9NRM7	1088 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GALP	Q9UBC7	116 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GULP1	Q9UBP9	304 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SLC39A10	Q9ULF5	831 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PRKAB1	Q9Y478	270 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DGKB	Q9Y6T7	804 aa		13.74	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TRIM49D1	C9J1S8	452 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852		F8W8V4	182 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KMO	O15229	486 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	EPN2	O95208	641 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FTH1	P02794	183 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ALDOA	P04075	364 aa	Known RBP	13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CLCN7	P51798	805 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PGGT1B	P53609	377 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PPARD	Q03181	441 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DNAJC3	Q13217	504 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TEAD4	Q15561	434 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZNF658B	Q4V348	819 aa	Predicted RBP	13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CEP97	Q8IW35	865 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OXR1	Q8N573	874 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SKA1	Q96BD8	255 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MTBP	Q96DY7	904 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ATP6V1G3	Q96LB4	118 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CCM2	Q9BSQ5	444 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CARS2	Q9HA77	564 aa	Known RBP	13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TAS2R13	Q9NYV9	303 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ZNHIT2	Q9UHR6	403 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	KLF15	Q9UIH9	416 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MOSPD1	Q9UJG1	213 aa		13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.73	□□□□□ -0.21
ATPAF2-208	ENST00000496852	C17orf113	A0A1B0GUU1	675 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852		A0A1B0GVT2	93 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852		E5RI56	91 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852		H3BQF6	201 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	VPS26A	O75436	327 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	POP7	O75817	140 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RASGRP1	O95267	797 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TRIM16	O95361	564 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	WISP3	O95389	354 aa	Predicted RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MT-ND3	P03897	115 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GSTM1	P09488	218 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ITGB6	P18564	788 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CHRM3	P20309	590 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CCR7	P32248	378 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MAGEA12	P43365	314 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GNPDA1	P46926	289 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	HK3	P52790	923 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	C21orf59	P57076	290 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	MAGOH	P61326	146 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	BNC1	Q01954	994 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GSTM4	Q03013	218 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	USP10	Q14694	798 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DUOXA1	Q1HG43	343 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	AGBL2	Q5U5Z8	902 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	XKR5	Q6UX68	686 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TIFAB	Q6ZNK6	161 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	RABEPK	Q7Z6M1	372 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CMC1	Q7Z7K0	106 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GALNT13	Q8IUC8	556 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SRRM1	Q8IYB3	904 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GIMAP7	Q8NHV1	300 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CD200R1	Q8TD46	325 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	FAM136A	Q96C01	138 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	PGM2	Q96G03	612 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	OR2M4	Q96R27	311 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	GPR21	Q99679	349 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SLC30A3	Q99726	388 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TSSK1B	Q9BXA7	367 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	POPDC3	Q9HBV1	291 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	TM7SF3	Q9NS93	570 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	SLC23A2	Q9UGH3	650 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	ANKRD6	Q9Y2G4	727 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	DHRS7	Q9Y394	339 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	CABIN1	Q9Y6J0	2220 aa		13.72	□□□□□ -0.21
ATPAF2-208	ENST00000496852	VPS13A	Q96RL7	3174 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms