RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 SYDE1Q6ZW31 735 aaPredicted RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 USP53Q70EK8 1073 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SPRED1Q7Z699 444 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 PCGF5Q86SE9 256 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SLC9B2Q86UD5 537 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 CFAP206Q8IYR0 622 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SFRP1Q8N474 314 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 LILRA3Q8N6C8 439 aaPredicted RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 HEXDCQ8WVB3 486 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 PWWP2AQ96N64 755 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 GFM1Q96RP9 751 aaKnown RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 TTC1Q99614 292 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SLC38A3Q99624 504 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 KIFC1Q9BW19 673 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 FOXP3Q9BZS1 431 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 DPH5Q9H2P9 285 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 LRRN3Q9H3W5 708 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 TREX1Q9NSU2 369 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 IL1RAPL1Q9NZN1 696 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 MARCH4Q9P2E8 410 aaPredicted RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 CPNE7Q9UBL6 633 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SNX24Q9Y343 169 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 MSRB2Q9Y3D2 182 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 PCDHB1Q9Y5F3 818 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 MAP1BP46821 2468 aaKnown RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 IGLV3-16A0A075B6K0 115 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 KIR2DS5A0A0G2JLQ3 304 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 PRAMEF33A0A0G2JMD5 474 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 A0A0G2JNG1 304 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 OR5K4A6NMS3 321 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 OR52A4PA6NMU1 304 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 KIR2DS3K7RE56 304 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 RAD51CO43502 376 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 B4GAT1O43505 415 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 VIPP01282 170 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 BRAFP15056 766 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 IVDP26440 423 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 SLC19A1P41440 591 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 HALP42357 657 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 NSG1P42857 185 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 RPL21P46778 160 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 PRLHRP49683 370 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 ITGA8P53708 1063 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CSE1LP55060 971 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 ITIH4Q14624 930 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 KIR2DS5Q14953 304 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CLCA4Q14CN2 919 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 ANKRD20A4Q4UJ75 823 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 LYPLAL1Q5VWZ2 237 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CDCP2Q5VXM1 449 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 NKAIN2Q5VXU1 208 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 NAPRTQ6XQN6 538 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CERS6Q6ZMG9 384 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 RBM44Q6ZP01 1051 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 HOOK3Q86VS8 718 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 AGGF1Q8N302 714 aaeCLIP9.64□□□□□ -0.872e-6■■□□□ 12.3
CALD1-223ENST00000496024 DCBLD1Q8N8Z6 715 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 OR2L2Q8NH16 312 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 PEX13Q92968 403 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CXorf40BQ96DE9 158 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 STAMBPL1Q96FJ0 436 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 SNF8Q96H20 258 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 SIGLEC10Q96LC7 697 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 FCRL3Q96P31 734 aaPredicted RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 DEPDC7Q96QD5 511 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CCM2Q9BSQ5 444 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 TBC1D10AQ9BXI6 508 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 WWP1Q9H0M0 922 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 STN1Q9H668 368 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 RDH14Q9HBH5 336 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 MRM3Q9HC36 420 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 KCNK4Q9NYG8 393 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 ZNF624Q9P2J8 865 aaPredicted RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 CDC23Q9UJX2 597 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 WDR37Q9Y2I8 494 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 CFAP20Q9Y6A4 193 aaKnown RBP9.64□□□□□ -0.87
CALD1-223ENST00000496024 RPS6KL1Q9Y6S9 549 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 ACACAQ13085 2346 aa9.64□□□□□ -0.87
CALD1-223ENST00000496024 FAM237BA0A1B0GVD1 139 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 UBA6A0AVT1 1052 aaPredicted RBP9.63□□□□□ -0.87
CALD1-223ENST00000496024 MAGEB16A2A368 324 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 TRABD2BA6NFA1 517 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 PRR19A6NJB7 356 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 D6RAR5 112 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 NTN3O00634 580 aaPredicted RBP9.63□□□□□ -0.87
CALD1-223ENST00000496024 KCNJ13O60928 360 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 NDUFS3O75489 264 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 F7P08709 466 aaPredicted RBP9.63□□□□□ -0.87
CALD1-223ENST00000496024 OR56A5P0C7T3 313 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 C1QTNF9P0C862 333 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 PNLIPP16233 465 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 PAMP19021 973 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 ARNTP27540 789 aa9.63□□□□□ -0.87
CALD1-223ENST00000496024 PPARGP37231 505 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms