RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TSPAN17Q96FV3 270 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 SH3GL2Q99962 352 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 UNKQ9C0B0 810 aaKnown RBP19.08■□□□□ 0.64
USP39-218ENST00000493829 TMEM74BQ9NUR3 256 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 TAS2R13Q9NYV9 303 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 NOVA2Q9UNW9 492 aaKnown RBP19.08■□□□□ 0.64
USP39-218ENST00000493829 DNAJC16Q9Y2G8 782 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 GPSM3Q9Y4H4 160 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 LILRB5O75023 590 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 TOP3BO95985 862 aaKnown RBP19.07■□□□□ 0.64
USP39-218ENST00000493829 PYGBP11216 843 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 ACP5P13686 325 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 CCR7P32248 378 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 CLCN7P51798 805 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 PPARDQ03181 441 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 ALG11Q2TAA5 492 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 SYTL3Q4VX76 610 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 CHST15Q7LFX5 561 aaPredicted RBP19.07■□□□□ 0.64
USP39-218ENST00000493829 TRABD2AQ86V40 505 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 HID1Q8IV36 788 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 SPATA6LQ8N4H0 392 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 MFSD2AQ8NA29 543 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 CD200R1Q8TD46 325 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 PANX3Q96QZ0 392 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 TSSK1BQ9BXA7 367 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 GPAMQ9HCL2 828 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 PLEKHM1Q9Y4G2 1056 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 LRP4O75096 1905 aa19.07■□□□□ 0.64
USP39-218ENST00000493829 TP53BP1Q12888 1972 aaPredicted RBP19.07■□□□□ 0.64
USP39-218ENST00000493829 ZNF318Q5VUA4 2279 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 PIKFYVEQ9Y2I7 2098 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 USP34Q70CQ2 3546 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 A0A096LPK6 155 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 CHUKO15111 745 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 ATP8B1O43520 1251 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 SLC34A2O95436 690 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 SLC35E2BP0CK96 405 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 AFF3P51826 1226 aaKnown RBP19.06■□□□□ 0.64
USP39-218ENST00000493829 SRP54P61011 504 aaKnown RBP19.06■□□□□ 0.64
USP39-218ENST00000493829 PTK2BQ14289 1009 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 FZD2Q14332 565 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 ZKSCAN8Q15776 578 aaPredicted RBP19.06■□□□□ 0.64
USP39-218ENST00000493829 INSCQ1MX18 579 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 TAF1BQ53T94 588 aaPredicted RBP19.06■□□□□ 0.64
USP39-218ENST00000493829 PAQR3Q6TCH7 311 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 OTOAQ7RTW8 1153 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 CPNE9Q8IYJ1 553 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 ZBTB2Q8N680 514 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 LILRA3Q8N6C8 439 aaPredicted RBP19.06■□□□□ 0.64
USP39-218ENST00000493829 ZC3H10Q96K80 434 aaKnown RBP19.06■□□□□ 0.64
USP39-218ENST00000493829 CCM2Q9BSQ5 444 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 GPR27Q9NS67 375 aa19.06■□□□□ 0.64
USP39-218ENST00000493829 SPTY2D1-AS1A0A0U1RR47 76 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 TLR4O00206 839 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 QSOX1O00391 747 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 TOR1BO14657 336 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 POP7O75817 140 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 RASGRP1O95267 797 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 SYF2O95926 243 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 CREB1P16220 341 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 KRT4P19013 534 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 ATP5DP30049 168 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 PREPP48147 710 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 C21orf59P57076 290 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 HSPA14Q0VDF9 509 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 TMEM207Q6UWW9 146 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 SPATS2Q86XZ4 545 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 ZNF514Q96K75 400 aaPredicted RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 OR2M4Q96R27 311 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 STMN4Q9H169 189 aaPredicted RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 TCEAL2Q9H3H9 227 aaPredicted RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 FSCN3Q9NQT6 498 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 SPATS2LQ9NUQ6 558 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 SLC23A2Q9UGH3 650 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 KCNK6Q9Y257 313 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 SPAG17Q6Q759 2223 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 A0A1B0GVT2 93 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 F8W8V4 182 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 SPAG7O75391 227 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 C2P06681 752 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 GNSP15586 552 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 MAGEA12P43365 314 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 MAGOHP61326 146 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 ILF2Q12905 390 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 EIF2B5Q13144 721 aaKnown RBP19.05■□□□□ 0.64
USP39-218ENST00000493829 NFE2L1Q14494 772 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 PYCR3Q53H96 274 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 C11orf96Q7Z7L8 435 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 PARGQ86W56 976 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 ANKRD49Q8WVL7 239 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 ISL2Q96A47 359 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 ATP6V1G3Q96LB4 118 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 SLC13A1Q9BZW2 595 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 OSGEPL1Q9H4B0 414 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 DNAJC28Q9NX36 388 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 TLK1Q9UKI8 766 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 PILRBQ9UKJ0 227 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 GPR34Q9UPC5 381 aa19.05■□□□□ 0.64
USP39-218ENST00000493829 A0A1B0GTW7 788 aa19.04■□□□□ 0.64
USP39-218ENST00000493829 GPR89AB7ZAQ6 455 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms