RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MORF4L2Q15014 288 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 PACS1Q6VY07 963 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 ZNF572Q7Z3I7 529 aaPredicted RBP12.56□□□□□ -0.4
CLIP2-209ENST00000493166 ZNF438Q7Z4V0 828 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 CLDN19Q8N6F1 224 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 Q8N9G6 341 aaPredicted RBP12.56□□□□□ -0.4
CLIP2-209ENST00000493166 AVL9Q8NBF6 648 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 OR2L2Q8NH16 312 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 WDR48Q8TAF3 677 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 ZNF669Q96BR6 464 aaPredicted RBP12.56□□□□□ -0.4
CLIP2-209ENST00000493166 LINC00615Q96LM1 132 aaPredicted RBP12.56□□□□□ -0.4
CLIP2-209ENST00000493166 FAM8A1Q9UBU6 413 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 CLCA2Q9UQC9 943 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 MAD1L1Q9Y6D9 718 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 ACACBO00763 2458 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
CLIP2-209ENST00000493166 FAM237BA0A1B0GVD1 139 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 FAM187AA6NFU0 413 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 SMAPO00193 183 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 QSOX1O00391 747 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 NDC80O14777 642 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 RAD51CO43502 376 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 TCEA3O75764 348 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 AP2A2O94973 939 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 SEC31AO94979 1220 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 VAPBO95292 243 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 MT-CO3P00414 261 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 RPLP0P05388 317 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 ALDH4A1P30038 563 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 GPR3P46089 330 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 TTPAP49638 278 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 ITGA8P53708 1063 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 DRG2P55039 364 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 CCL7P80098 99 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 HHEXQ03014 270 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 TARDBPQ13148 414 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 SEMA3AQ14563 771 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 WHAMMP3Q1A5X7 153 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 ANKRD20A4Q4UJ75 823 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 AGAP9Q5VTM2 703 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 CDCP2Q5VXM1 449 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 KIAA0930Q6ICG6 404 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 WASH2PQ6VEQ5 465 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 CCNI2Q6ZMN8 369 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 FAM83HQ6ZRV2 1179 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 SPRED1Q7Z699 444 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 MARCH9Q86YJ5 346 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 TRIM48Q8IWZ4 208 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 HM13Q8TCT9 377 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 STAMBPL1Q96FJ0 436 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 DEPDC7Q96QD5 511 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 GFM1Q96RP9 751 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 SLC38A3Q99624 504 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 TRIM56Q9BRZ2 755 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 CCM2Q9BSQ5 444 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 LRRN3Q9H3W5 708 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-209ENST00000493166 CPNE7Q9UBL6 633 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 MSRB2Q9Y3D2 182 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 RPS6KL1Q9Y6S9 549 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 KNTC1P50748 2209 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 CHD8Q9HCK8 2581 aa12.55□□□□□ -0.4
CLIP2-209ENST00000493166 EPG5Q9HCE0 2579 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 FAM221BA6H8Z2 402 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 OR52A4PA6NMU1 304 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 GOLGA8KD6RF30 607 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 F8W8V4 182 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 GOLGA8TH3BQL2 631 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 NTN3O00634 580 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 CASC3O15234 703 aaKnown RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 PPM1DO15297 605 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 OR1I1O60431 355 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 USP1O94782 785 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 VIPP01282 170 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 FTH1P02794 183 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 OR56A5P0C7T3 313 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 BRAFP15056 766 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 ARNTP27540 789 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 RPL21P46778 160 aaKnown RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 PPM1FP49593 454 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 OR1D5P58170 312 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 NR1D2Q14995 579 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 BBS9Q3SYG4 887 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 METRNLQ641Q3 311 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 MRNIPQ6NTE8 343 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 HIBCHQ6NVY1 386 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 ABRAXAS1Q6UWZ7 409 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 LDB1Q86U70 411 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-209ENST00000493166 TMEM135Q86UB9 458 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 CFAP206Q8IYR0 622 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 PDIK1LQ8N165 341 aa12.54□□□□□ -0.4
CLIP2-209ENST00000493166 AGGF1Q8N302 714 aaeCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms