RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 LCN10Q6JVE6 187 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 ABRAXAS1Q6UWZ7 409 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 CNGA4Q8IV77 575 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 NLGN4XQ8N0W4 816 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 LMNTD1Q8N9Z9 388 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 NLGN4YQ8NFZ3 816 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 OR4K2Q8NGD2 314 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 VPS35Q96QK1 796 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 FCRL5Q96RD9 977 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 MAP3K3Q99759 626 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 FAM117AQ9C073 453 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KLHL25Q9H0H3 589 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 RMI1Q9H9A7 625 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 GPN2Q9H9Y4 310 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 IMP3Q9NV31 184 aaKnown RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 AKAP7Q9P0M2 348 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 NFKBIL1Q9UBC1 381 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 DNPEPQ9ULA0 475 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 R3HDM2Q9Y2K5 976 aaKnown RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 PIEZO2Q9H5I5 2752 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 RGSL1A5PLK6 1076 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 OR51F1A6NGY5 319 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 LILRA5A6NI73 299 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
HDAC3-211ENST00000491581 KCNN4O15554 427 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 SUV39H1O43463 412 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 PRAMEF1O95521 474 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 METTL18O95568 372 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 PDGFAP04085 211 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 NTRK1P04629 796 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 CTSBP07858 339 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ZFXP17010 805 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-211ENST00000491581 AKT1P31749 480 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ADRA1AP35348 466 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 HMGCLP35914 325 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 DLSTP36957 453 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 EMP3P54852 163 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 HADHBP55084 474 aaKnown RBP8.72□□□□□ -1.01
HDAC3-211ENST00000491581 GDF10P55107 478 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 FOXL2P58012 376 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 EIF3EP60228 445 aaKnown RBP8.72□□□□□ -1.01
HDAC3-211ENST00000491581 XIAPP98170 497 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 CDC20Q12834 499 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 CHAF1BQ13112 559 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 TFDP2Q14188 446 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ERV3-1Q14264 604 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 GPR19Q15760 415 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ANKRD20A2Q5SQ80 823 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ANKRD20A1Q5TYW2 823 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 CACHD1Q5VU97 1274 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ANKRD20A3Q5VUR7 823 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 DENND5AQ6IQ26 1287 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 BBS12Q6ZW61 710 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 VSIG1Q86XK7 387 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 SLC38A9Q8NBW4 561 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 STARD8Q92502 1023 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 CXorf40BQ96DE9 158 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 RBM41Q96IZ5 413 aaKnown RBP8.72□□□□□ -1.01
HDAC3-211ENST00000491581 RMDN2Q96LZ7 410 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 TIMM29Q9BSF4 260 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 ULBP3Q9BZM4 244 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 GBA3Q9H227 469 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 FBXO8Q9NRD0 319 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 CROTQ9UKG9 612 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 INTUQ9ULD6 942 aa8.72□□□□□ -1.01
HDAC3-211ENST00000491581 TMEM184BQ9Y519 407 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-211ENST00000491581 PJA2O43164 708 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 HCRTR1O43613 425 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 VEGFDO43915 354 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 KATNA1O75449 491 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 NDUFA10O95299 355 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 FTCDO95954 541 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 ITGB2P05107 769 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 RBP3P10745 1247 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PVRP15151 417 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 IDSP22304 550 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CD82P27701 267 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PDHA2P29803 388 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CTNNA1P35221 906 aaKnown RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 STAT5AP42229 794 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CAPZBP47756 277 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PREPP48147 710 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 NR2C2P49116 596 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 EPHA4P54764 986 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 TLE1Q04724 770 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 KCNAB2Q13303 367 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CLPPQ16740 277 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 SKOR2Q2VWA4 1001 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC70Q6NSX1 233 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 PWWP2BQ6NUJ5 590 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 C11orf63Q6NUN7 778 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 BORAQ6PGQ7 559 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 SARM1Q6SZW1 724 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 RANBP10Q6VN20 620 aa8.71□□□□□ -1.02
HDAC3-211ENST00000491581 AMZ2Q86W34 360 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms