RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, human

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSX2IP-208	ENST00000490476	FAM237A	A0A1B0GTK4	181 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476		A0A1W2PRG0	241 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TSPY2	A6NKD2	308 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CTDSP2	O14595	271 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CAPN9	O14815	690 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TP73	O15350	636 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PROP1	O75360	226 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ERAL1	O75616	437 aa	Known RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SLC25A12	O75746	678 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PRKCG	P05129	697 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PRR35	P0CG20	571 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TSPY3	P0CV98	308 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TSPY8	P0CW00	308 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CHRNB1	P11230	501 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SRD5A1	P18405	259 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ATP5F1	P24539	256 aa	Predicted RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ELAVL4	P26378	380 aa	Known RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CLCN3	P51790	818 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	DEFB103A	P81534	67 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SORD	Q00796	357 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TSPY1	Q01534	308 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SLC10A2	Q12908	348 aa	Predicted RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	OLIG2	Q13516	323 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	LPAL2	Q16609	132 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TCTN1	Q2MV58	587 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ESCO2	Q56NI9	601 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	RAB41	Q5JT25	222 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PLEKHS1	Q5SXH7	462 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	FKBP1C	Q5VVH2	108 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CLEC17A	Q6ZS10	378 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TICAM1	Q8IUC6	712 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	GALNT16	Q8N428	558 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PARP16	Q8N5Y8	322 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SUSD6	Q92537	303 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	AGAP2	Q99490	1192 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SRSF8	Q9BRL6	282 aa	Known RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	B3GNT4	Q9C0J1	378 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CDT1	Q9H211	546 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	MVB12B	Q9H7P6	319 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	MAGEE1	Q9HCI5	957 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	NDRG3	Q9UGV2	375 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	AGO2	Q9UKV8	859 aa	Known RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	A3GALT2	U3KPV4	340 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	KIAA1671	Q9BY89	1806 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ADGRG4	Q8IZF6	3080 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PDZD2	O15018	2839 aa		4.94	□□□□□ -1.62
SSX2IP-208	ENST00000490476	BOD1L1	Q8NFC6	3051 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	JMJD1C	Q15652	2540 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PCNX2	A6NKB5	2137 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	STAB1	Q9NY15	2570 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TRBV5-3	A0A0A0MS03	114 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SMIM35	A0A1B0GVV1	85 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476		A6NNC1	897 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	STMND1	H3BQB6	276 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PPP6C	O00743	305 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ADAM10	O14672	748 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	HTATSF1	O43719	755 aa	Known RBP	4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	NDUFS3	O75489	264 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	RGS11	O94810	467 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PGM3	O95394	542 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ASGR1	P07306	291 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	RET	P07949	1114 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CBSL	P0DN79	551 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ETFA	P13804	333 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	GABRB1	P18505	474 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SAT1	P21673	171 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	EPHB2	P29323	1055 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SHMT1	P34896	483 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	RFC2	P35250	354 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CBS	P35520	551 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CXCR3	P49682	368 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	MFAP4	P55083	255 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CCNA1	P78396	465 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	FOXF2	Q12947	444 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	IK	Q13123	557 aa	Predicted RBP	4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	GPR139	Q6DWJ6	353 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SLC30A6	Q6NXT4	461 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PDXDC1	Q6P996	788 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	PCSK4	Q6UW60	755 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	GPSM1	Q86YR5	675 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SCML4	Q8N228	414 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	TMTC2	Q8N394	836 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	FAM98A	Q8NCA5	519 aa	Known RBP	4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ZBTB44	Q8NCP5	570 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	CCDC191	Q8NCU4	936 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	KLHDC9	Q8NEP7	349 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	DDB2	Q92466	427 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	DPF1	Q92782	380 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	ELMOD3	Q96FG2	381 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	SIGLEC11	Q96RL6	698 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	AP1M1	Q9BXS5	423 aa		4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	IFIH1	Q9BYX4	1025 aa	Known RBP	4.93	□□□□□ -1.62
SSX2IP-208	ENST00000490476	RNF146	Q9NTX7	359 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms