RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 PLEKHM1Q9Y4G2 1056 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 TMEM184BQ9Y519 407 aaPredicted RBP10.21□□□□□ -0.77
TTC28-207ENST00000490475 MN1Q10571 1320 aaPredicted RBP10.21□□□□□ -0.78
TTC28-207ENST00000490475 TRBV23OR9-2A0A075B6M9 112 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 LOC285095A0A1B0GVY8 99 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 AGRPO00253 132 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 CEP104O60308 925 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 CDK14O94921 469 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 AGTP01019 485 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 FAM87AP0C7U9 286 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 ZNF8P17098 575 aaPredicted RBP10.2□□□□□ -0.78
TTC28-207ENST00000490475 AMD1P17707 334 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 IDSP22304 550 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 HMGCLP35914 325 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 HALP42357 657 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 WNT3AP56704 352 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 SNX1Q13596 522 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 SEPT6Q14141 434 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 IL11RAQ14626 422 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 SNAP47Q5SQN1 464 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 AGAP9Q5VTM2 703 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 ANKS6Q68DC2 871 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 KDELC1Q6UW63 502 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 TMEM26Q6ZUK4 368 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 SLC35F6Q8N357 371 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 SLC25A41Q8N5S1 370 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 EID2BQ96D98 161 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 ZDHHC12Q96GR4 267 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 MRGPRX2Q96LB1 330 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 GORASP1Q9BQQ3 440 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 OR2AG1Q9H205 316 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 KLC4Q9NSK0 619 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 OCIAD1Q9NX40 245 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 ATXN10Q9UBB4 475 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 IL17BQ9UHF5 180 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 SHOC2Q9UQ13 582 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 ZNF711Q9Y462 761 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 JRKLQ9Y4A0 524 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 PCDHB3Q9Y5E6 796 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 OAS3Q9Y6K5 1087 aaKnown RBP10.2□□□□□ -0.78
TTC28-207ENST00000490475 TENM4Q6N022 2769 aa10.2□□□□□ -0.78
TTC28-207ENST00000490475 C5orf60A6NFR6 353 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 PDZK1P1A8MUH7 402 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 SUV39H1O43463 412 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 LIASO43766 372 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 STK17BO94768 372 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 STK10O94804 968 aaKnown RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 UBXN7O94888 489 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 FGGP02679 453 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 C9P02748 559 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 MT-ND3P03897 115 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 LIFP15018 202 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ZNF7P17097 686 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 ITGB6P18564 788 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 MPSTP25325 297 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 PSMB4P28070 264 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 CHRNA4P43681 627 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 MAPK9P45984 424 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 GDF10P55107 478 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 UBE2IP63279 158 aaKnown RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 OLIG2Q13516 323 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ITGA9Q13797 1035 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 SIX1Q15475 284 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 SIRPB2Q5JXA9 342 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ITPRIPL1Q6GPH6 555 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ABRAXAS1Q6UWZ7 409 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ADGRG6Q86SQ4 1221 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 BPHLQ86WA6 291 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 TAB3Q8N5C8 712 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 BEND7Q8N7W2 519 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 GPR26Q8NDV2 337 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 IPMKQ8NFU5 416 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 SEC14L1Q92503 715 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ANKRD7Q92527 254 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 CXorf40BQ96DE9 158 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ZNF514Q96K75 400 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 C9orf72Q96LT7 481 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 SPATA13Q96N96 652 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 SPRY4Q9C004 299 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 RAB33BQ9H082 229 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 GBA3Q9H227 469 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 TMEM9Q9P0T7 183 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 EPHA6Q9UF33 1036 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 ANAPC2Q9UJX6 822 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 KCND3Q9UK17 655 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 PRKAB1Q9Y478 270 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 SPO11Q9Y5K1 396 aa10.19□□□□□ -0.78
TTC28-207ENST00000490475 DNMT3AQ9Y6K1 912 aaPredicted RBP10.19□□□□□ -0.78
TTC28-207ENST00000490475 BOD1L1Q8NFC6 3051 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 A8MU76 341 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 TERTO14746 1132 aaKnown RBP10.18□□□□□ -0.78
TTC28-207ENST00000490475 AURKAO14965 403 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 METTL18O95568 372 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 EML2O95834 649 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 RECKO95980 971 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 HLA-DPA1P20036 260 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 ARSDP51689 593 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 POLE2P56282 527 aa10.18□□□□□ -0.78
TTC28-207ENST00000490475 SRSF6Q13247 344 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms