RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TYSND1Q2T9J0 566 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ANKRD20A4Q4UJ75 823 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 METRNLQ641Q3 311 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 DUPD1Q68J44 220 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 IYDQ6PHW0 289 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 TMPRSS7Q7RTY8 843 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 SDCCAG8Q86SQ7 713 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 SLC9B2Q86UD5 537 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CALML6Q8TD86 181 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ZNF592Q92610 1267 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CCDC74AQ96AQ1 378 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 MFSD3Q96ES6 412 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 SGF29Q96ES7 293 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 STAMBPL1Q96FJ0 436 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 CCM2Q9BSQ5 444 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 OSGEPL1Q9H4B0 414 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 EPB41L1Q9H4G0 881 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 FAM96AQ9H5X1 160 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 POT1Q9NUX5 634 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 SIRPGQ9P1W8 387 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 LRIT1Q9P2V4 623 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 SLC23A2Q9UGH3 650 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ANGPTL2Q9UKU9 493 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 PLEKHM1Q9Y4G2 1056 aa10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ARHGEF17Q96PE2 2063 aaPredicted RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
CPSF7-212ENST00000489728 ZCWPW2A0A1B0GU75 182 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 OR51F1A6NGY5 319 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 RHPN2P1A8MT19 583 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 E7ESA3 106 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 TP73O15350 636 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 VAPBO95292 243 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 OR56A5P0C7T3 313 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 XRCC1P18887 633 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 RPS3P23396 243 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 RPL21P46778 160 aaKnown RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 CDKN1CP49918 316 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 ITGA8P53708 1063 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 TERF1P54274 439 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 EPHA4P54764 986 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 FOXC1Q12948 553 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 BIRC2Q13490 618 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 SQSTM1Q13501 440 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 FRG1Q14331 258 aaKnown RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 PLA2G4EQ3MJ16 856 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 ZNF658BQ4V348 819 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 CDCP2Q5VXM1 449 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 C8orf74Q6P047 294 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 ZNF449Q6P9G9 518 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 DHRS13Q6UX07 377 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 DET1Q7L5Y6 550 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 SPRED1Q7Z699 444 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 ARL14Q8N4G2 192 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 DCBLD1Q8N8Z6 715 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 SLC37A2Q8TED4 501 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 DPYSL5Q9BPU6 564 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 CCDC3Q9BQI4 270 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 FAM167BQ9BTA0 163 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 FAM129AQ9BZQ8 928 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 FOXP3Q9BZS1 431 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 ABCG4Q9H172 646 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 INTS10Q9NVR2 710 aaKnown RBP10.88□□□□□ -0.67
CPSF7-212ENST00000489728 MAD1L1Q9Y6D9 718 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 RPS6KL1Q9Y6S9 549 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 RNF215Q9Y6U7 377 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 FAM169AQ9Y6X4 670 aa10.88□□□□□ -0.67
CPSF7-212ENST00000489728 MED19A0JLT2 244 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CTAGE15A4D2H0 777 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 LILRA5A6NI73 299 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 H3BMM5 538 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 NTN3O00634 580 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PRMT5O14744 637 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 LIN7AO14910 233 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 EIF3HO15372 352 aaKnown RBP eCLIP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 SLC35G4P0C7Q5 338 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CTAGE8P0CG41 777 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CD151P48509 253 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 MAZP56270 477 aaKnown RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 UBE2IP63279 158 aaKnown RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 GPLD1P80108 840 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 HHEXQ03014 270 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CRYMQ14894 314 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 GLE1Q53GS7 698 aaKnown RBP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 SPANXN3Q5MJ09 141 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 PERM1Q5SV97 790 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 HES3Q5TGS1 186 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 NEPROQ6NW34 567 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CTAGE6Q86UF2 777 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CILP2Q8IUL8 1156 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 CTAGE4Q8IX94 777 aa10.87□□□□□ -0.67
CPSF7-212ENST00000489728 AGGF1Q8N302 714 aaeCLIP10.87□□□□□ -0.67
CPSF7-212ENST00000489728 MMGT1Q8N4V1 131 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms