RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SEPT6Q14141 434 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 GPR18Q14330 331 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 MANEAQ5SRI9 462 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 TMEM164Q5U3C3 297 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 PRUNE1Q86TP1 453 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 AMZ2Q86W34 360 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 BMPERQ8N8U9 685 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 RSC1A1Q92681 617 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 DNAJC1Q96KC8 554 aaKnown RBP13.76□□□□□ -0.21
VTI1A-206ENST00000489142 TGM7Q96PF1 710 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.76□□□□□ -0.21
VTI1A-206ENST00000489142 APMAPQ9HDC9 416 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 SMOXQ9NWM0 555 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 PDP2Q9P2J9 529 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 KALRNO60229 2985 aa13.76□□□□□ -0.21
VTI1A-206ENST00000489142 PPFIA2O75334 1257 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 CRTAMO95727 393 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 PRSS56P0CW18 603 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 AMD1P17707 334 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
VTI1A-206ENST00000489142 CDKN1CP49918 316 aaPredicted RBP13.75□□□□□ -0.21
VTI1A-206ENST00000489142 PPP1CAP62136 330 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 XIAPP98170 497 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 SNX1Q13596 522 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 LY6DQ14210 128 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 KCTD11Q693B1 232 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 DUS1LQ6P1R4 473 aaKnown RBP13.75□□□□□ -0.21
VTI1A-206ENST00000489142 ABRAXAS1Q6UWZ7 409 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 ARHGAP22Q7Z5H3 698 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 LILRA3Q8N6C8 439 aaPredicted RBP13.75□□□□□ -0.21
VTI1A-206ENST00000489142 TTC13Q8NBP0 860 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 CCDC112Q8NEF3 446 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 DTX3LQ8TDB6 740 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 SLC40A1Q9NP59 571 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 CRLS1Q9UJA2 301 aa13.75□□□□□ -0.21
VTI1A-206ENST00000489142 MN1Q10571 1320 aaPredicted RBP13.74□□□□□ -0.21
VTI1A-206ENST00000489142 STMND1H3BQB6 276 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 ERVH48-1M5A8F1 160 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 CAPN5O15484 640 aaPredicted RBP13.74□□□□□ -0.21
VTI1A-206ENST00000489142 LDB2O43679 373 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 KIF1CO43896 1103 aaKnown RBP13.74□□□□□ -0.21
VTI1A-206ENST00000489142 ETS1P14921 441 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 MC4RP32245 332 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 HALP42357 657 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 SEPHS1P49903 392 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 CYP4F2P78329 520 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 RHDQ02161 417 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 POU6F1Q14863 301 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 RPE65Q16518 533 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 KCTD19Q17RG1 926 aaPredicted RBP13.74□□□□□ -0.21
VTI1A-206ENST00000489142 PARP6Q2NL67 630 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 SEL1L2Q5TEA6 688 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 FAM92BQ6ZTR7 304 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 DTX1Q86Y01 620 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 AVL9Q8NBF6 648 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
VTI1A-206ENST00000489142 SNRNP27Q8WVK2 155 aaKnown RBP13.74□□□□□ -0.21
VTI1A-206ENST00000489142 C1orf54Q8WWF1 131 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 TTC9Q92623 222 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 DDA1Q9BW61 102 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 TSGA10Q9BZW7 698 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 SEMA4CQ9C0C4 833 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 UCK1Q9HA47 277 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 LZTFL1Q9NQ48 299 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 POT1Q9NUX5 634 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 PCDHB11Q9Y5F2 797 aa13.74□□□□□ -0.21
VTI1A-206ENST00000489142 PIKFYVEQ9Y2I7 2098 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 B4E171 279 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 SGTAO43765 313 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 LIASO43766 372 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 RASSF9O75901 435 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 POLBP06746 335 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 CD82P27701 267 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 TSPAN7P41732 249 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 CAPZBP47756 277 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 GSDMDP57764 484 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 DMPKQ09013 629 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 P3H1Q32P28 736 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 CCDC38Q502W7 563 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 ZRANB3Q5FWF4 1079 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 DCAF12Q5T6F0 453 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 IRGCQ6NXR0 463 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 XKR5Q6UX68 686 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 WASH2PQ6VEQ5 465 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 PLXDC1Q8IUK5 500 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 NXPE1Q8N323 547 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 RNF10Q8N5U6 811 aaKnown RBP13.73□□□□□ -0.21
VTI1A-206ENST00000489142 NKD1Q969G9 470 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 RTP4Q96DX8 246 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 C9orf72Q96LT7 481 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 PPP1R2P1Q96PQ5 205 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 EPB41L1Q9H4G0 881 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 LRRC40Q9H9A6 602 aa13.73□□□□□ -0.21
VTI1A-206ENST00000489142 ARNT2Q9HBZ2 717 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms