RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GARSP41250 739 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 CAMPP49913 170 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 DCAF7P61962 342 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 LRMPQ12912 555 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 ZNF876PQ49A33 203 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 RARS2Q5T160 578 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 FAM53AQ6NSI3 398 aaPredicted RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 FAM180BQ6P0A1 224 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 SARM1Q6SZW1 724 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 RBMS3Q6XE24 437 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 C15orf39Q6ZRI6 1047 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 TPRG1Q6ZUI0 275 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 TBC1D1Q86TI0 1168 aaPredicted RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 PTOV1Q86YD1 416 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 ZNF843Q8N446 348 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 PAF1Q8N7H5 531 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 CNBD1Q8NA66 436 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 CTCFLQ8NI51 663 aaPredicted RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 TAS1R2Q8TE23 839 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 LGALS12Q96DT0 336 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 PSD2Q9BQI7 771 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 FSD1Q9BTV5 496 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 RBM4Q9BWF3 364 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 RAD21L1Q9H4I0 556 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 KAT14Q9H8E8 782 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 PELI2Q9HAT8 420 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 APOBEC3GQ9HC16 384 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 KRT84Q9NSB2 600 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 PTTG2Q9NZH5 202 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 FBXL17Q9UF56 701 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 DBNLQ9UJU6 430 aaKnown RBP3.4□□□□□ -1.87
RFC4-213ENST00000489028 JRKLQ9Y4A0 524 aa3.4□□□□□ -1.87
RFC4-213ENST00000489028 PI4KAP2A4QPH2 592 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 DUXAA6NLW8 204 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SH3BP5O60239 455 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 HS6ST1O60243 411 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 EIF5BO60841 1220 aaKnown RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 TPPPO94811 219 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SRPRAP08240 638 aaKnown RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 TMEM11P17152 192 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 PAX3P23760 479 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 ARL3P36405 182 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 HADHAP40939 763 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 GNB1P62873 340 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 PPP2R2BQ00005 443 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 IKQ13123 557 aaPredicted RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 MEP1AQ16819 746 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 DUOXA1Q1HG43 343 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 NDUFAF5Q5TEU4 345 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 CCDC30Q5VVM6 783 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 WDSUB1Q8N9V3 476 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 RDM1Q8NG50 284 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 PPP4R1Q8TF05 950 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SMPDL3BQ92485 455 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 PRMT6Q96LA8 375 aaPredicted RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 SLC22A12Q96S37 553 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 DDOQ99489 341 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 NAP1L4Q99733 375 aaKnown RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 HGH1Q9BTY7 390 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 GFRA4Q9GZZ7 299 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 BICC1Q9H694 974 aaKnown RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 SLA2Q9H6Q3 261 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SH2D4AQ9H788 454 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SEPT11Q9NVA2 429 aaKnown RBP3.39□□□□□ -1.87
RFC4-213ENST00000489028 SLC38A7Q9NVC3 462 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 OGFRQ9NZT2 677 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 CMAHPQ9Y471 501 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 YIPF1Q9Y548 306 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SESN1Q9Y6P5 492 aa3.39□□□□□ -1.87
RFC4-213ENST00000489028 SNED1Q8TER0 1413 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 MYO1GB0I1T2 1018 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 F5H0A9 414 aaPredicted RBP3.38□□□□□ -1.87
RFC4-213ENST00000489028 H0YIN7 160 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 TMCC2O75069 709 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 PTP4A3O75365 173 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 PRSS56P0CW18 603 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 ACADMP11310 421 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 ACTN1P12814 892 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 CBLP22681 906 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 PON1P27169 355 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 HOXC8P31273 242 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 NR2C2P49116 596 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 THOP1P52888 689 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 CDH8P55286 799 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 PRKAA1Q13131 559 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 DDX10Q13206 875 aaKnown RBP3.38□□□□□ -1.87
RFC4-213ENST00000489028 PPIGQ13427 754 aaKnown RBP eCLIP3.38□□□□□ -1.875e-7■■□□□ 13.3
RFC4-213ENST00000489028 MAMLD1Q13495 774 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 FAAH2Q6GMR7 532 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 FBXL22Q6P050 247 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 CHST9Q7L1S5 443 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 MAATS1Q7Z4T9 603 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 CRYBG2Q8N1P7 616 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 POMGNT1Q8WZA1 660 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 HDAC2Q92769 488 aaKnown RBP3.38□□□□□ -1.87
RFC4-213ENST00000489028 SEMA4DQ92854 862 aa3.38□□□□□ -1.87
RFC4-213ENST00000489028 ZNF582Q96NG8 517 aaPredicted RBP3.38□□□□□ -1.87
RFC4-213ENST00000489028 NUDCD1Q96RS6 583 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms