RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 AATKQ6ZMQ8 1374 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 COL4A3Q01955 1670 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 A0A1B0GTW7 788 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 C13orf42A0A1B0GVH6 325 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 FAM230AA0A1W2PPH8 454 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 A1L4Q6 167 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CTAGE15A4D2H0 777 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TRIM49BA6NDI0 452 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CFAP73A6NFT4 308 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 AHRRA9YTQ3 701 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 DIRC3C9JPN6 131 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TRIM77I1YAP6 450 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 M0QX08 132 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 LEFTY2O00292 366 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 EBAG9O00559 213 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CLDN3O15551 220 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 STRNO43815 780 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TMPRSS11DO60235 418 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CNTN5O94779 1100 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CXCL10P02778 98 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 HIST1H2ABP04908 130 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ENO1P06733 434 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ASGR1P07306 291 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CTAGE8P0CG41 777 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SKILP12757 684 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SLC2A4P14672 509 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CREB1P16220 341 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CYP11B2P19099 503 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 FUT1P19526 365 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 HIST1H2ADP20671 130 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ZFP36P26651 326 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SLC8A1P32418 973 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SHMT1P34896 483 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RFC4P35249 363 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TAGLN2P37802 199 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 STAT6P42226 847 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CD151P48509 253 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CLCNKAP51800 687 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 JAK3P52333 1124 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ARSFP54793 590 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RPS7P62081 194 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TXNL4AP83876 142 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RHAGQ02094 409 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 OCA2Q04671 838 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CCDC15Q0P6D6 951 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 GRIK3Q13003 919 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 GAB1Q13480 694 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 VEPH1Q14D04 833 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CEBPEQ15744 281 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ME3Q16798 604 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 USP41Q3LFD5 358 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CFAP221Q4G0U5 840 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 GLE1Q53GS7 698 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 XKR9Q5GH70 373 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TBC1D9BQ66K14 1250 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 HIST3H2AQ7L7L0 130 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 MAVSQ7Z434 540 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CTAGE6Q86UF2 777 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TDRPQ86YL5 185 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RASAL3Q86YV0 1011 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 FAM219AQ8IW50 185 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CTAGE4Q8IX94 777 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 DDIASQ8IXT1 998 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CCDC13Q8IYE1 715 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 C16orf71Q8IYS4 520 aaPredicted RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RASGEF1AQ8N9B8 481 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 L3MBTL4Q8NA19 623 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SLC24A4Q8NFF2 622 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CCDC148Q8NFR7 591 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 OR2T34Q8NGX1 318 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 B4GALNT2Q8NHY0 566 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 BBS10Q8TAM1 723 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SNX19Q92543 992 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 RAD54LQ92698 747 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 THRSPQ92748 146 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CAVIN3Q969G5 261 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 DTD2Q96FN9 168 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CFAP36Q96G28 342 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 ADAD1Q96M93 576 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 COQ10AQ96MF6 247 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 NECTIN4Q96NY8 510 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SNX18Q96RF0 628 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 PRR25Q96S07 402 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 DCLRE1CQ96SD1 692 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 GCOM2Q9BZD3 368 aaPredicted RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 MTMR12Q9C0I1 747 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 CARD9Q9H257 536 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 MINDY3Q9H8M7 445 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 SRD5A3Q9H8P0 318 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 GORASP2Q9H8Y8 452 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 GLOD4Q9HC38 313 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 LARSQ9P2J5 1176 aaKnown RBP3.36□□□□□ -1.87
PRPF4-203ENST00000488937 DKK2Q9UBU2 259 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 KCNN3Q9UGI6 736 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 HACL1Q9UJ83 578 aa3.36□□□□□ -1.87
PRPF4-203ENST00000488937 TSPAN16Q9UKR8 245 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms