RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 HALP42357 657 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 DRG2P55039 364 aaKnown RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 SH3BP2P78314 561 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 GTF2H3Q13889 308 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 TRIM14Q14142 442 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 PRKD1Q15139 912 aaPredicted RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 ASTE1Q2TB18 679 aaPredicted RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 ATP13A5Q4VNC0 1218 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 TEX44Q53QW1 395 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 CACHD1Q5VU97 1274 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 ZDHHC20Q5W0Z9 365 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 CCDC70Q6NSX1 233 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 NPNTQ6UXI9 565 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 C11orf96Q7Z7L8 435 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 RFX6Q8HWS3 928 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 RASGRP3Q8IV61 690 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 RHOT2Q8IXI1 618 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 SPATA22Q8NHS9 363 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 SLC35G2Q8TBE7 412 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 DTX3LQ8TDB6 740 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 KLHL6Q8WZ60 621 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 TEKT5Q96M29 485 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 ANP32EQ9BTT0 268 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 ZCCHC2Q9C0B9 1178 aaKnown RBP8.38□□□□□ -1.07
PRKCB-208ENST00000487674 RAB33BQ9H082 229 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 TRABDQ9H4I3 376 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 GLOD4Q9HC38 313 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 EPHA6Q9UF33 1036 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 LNPEPQ9UIQ6 1025 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 KCND3Q9UK17 655 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 TMPRSS11EQ9UL52 423 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 POLHQ9Y253 713 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
PRKCB-208ENST00000487674 CLEC18AA5D8T8 446 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 C21orf140B9A014 251 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 MKRN2OSH3BPM6 223 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 AURKAO14965 403 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 MTSS1O43312 755 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 KIF1CO43896 1103 aaKnown RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 AKR1B10O60218 316 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 RFPL1O75677 317 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 MT-ND3P03897 115 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 NELFEP18615 380 aaKnown RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 PTPN3P26045 913 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 SPAM1P38567 509 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 SLC1A1P43005 524 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TNNT3P45378 269 aaPredicted RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 NR2C2P49116 596 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 PMS2P54278 862 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 DYNLT1P63172 113 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 DMPKQ09013 629 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TMEM115Q12893 351 aaPredicted RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 KLRB1Q12918 225 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TUBB3Q13509 450 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 DNASE1L3Q13609 305 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 ODF2Q5BJF6 829 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TCTN3Q6NUS6 607 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 IRGCQ6NXR0 463 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 KLHL35Q6PF15 583 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 CLEC18BQ6UXF7 455 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 FAM92BQ6ZTR7 304 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 BZW1Q7L1Q6 419 aaKnown RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 AMZ2Q86W34 360 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 PPP1R3BQ86XI6 285 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 RHOT1Q8IXI2 618 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 CLEC18CQ8NCF0 446 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 DDHD1Q8NEL9 900 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 OR8K1Q8NGG5 319 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 GDAP1Q8TB36 358 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 BRSK1Q8TDC3 778 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TFB1MQ8WVM0 346 aaKnown RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 UBXN4Q92575 508 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 ELMO2Q96JJ3 720 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 SLC41A2Q96JW4 573 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TTC25Q96NG3 672 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 BPIFA1Q9NP55 256 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 PDE7BQ9NP56 450 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 IL26Q9NPH9 171 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 IGSF5Q9NSI5 407 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 ZNHIT6Q9NWK9 470 aaKnown RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 DDX56Q9NY93 547 aaKnown RBP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRKCB-208ENST00000487674 HACD3Q9P035 362 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 SEMA5BQ9P283 1151 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 ANKMY1Q9P2S6 941 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 FAM153AQ9UHL3 310 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 TP53TG5Q9Y2B4 290 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 WDR37Q9Y2I8 494 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 PCDHGA6Q9Y5G7 932 aa8.37□□□□□ -1.07
PRKCB-208ENST00000487674 SPTAN1Q13813 2472 aaKnown RBP8.36□□□□□ -1.07
PRKCB-208ENST00000487674 GLYATL1P3A0A0U1RQE8 302 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 LOC285095A0A1B0GVY8 99 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 KATNA1O75449 491 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 SPAG6O75602 509 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 CREG1O75629 220 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 RECKO95980 971 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 EPOP01588 193 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 CCNYL3P0C7X3 344 aa8.36□□□□□ -1.07
PRKCB-208ENST00000487674 NFKB1P19838 968 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms