RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KLHL32Q96NJ5 620 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 ASB16Q96NS5 453 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 NSUN5Q96P11 429 aaKnown RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 VPS35Q96QK1 796 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 ZSCAN5AQ9BUG6 496 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 BOCQ9BWV1 1114 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 MCOLN1Q9GZU1 580 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PIDD1Q9HB75 910 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 IL36AQ9UHA7 158 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 DENND4AQ7Z401 1863 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 GRXCR2A6NFK2 248 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PIP5K1BO14986 540 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SLC16A5O15375 505 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 GPR39O43194 453 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 OTCP00480 354 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PRNPP04156 253 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 C8GP07360 202 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 MPC1LP0DKB6 136 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 SYN1P17600 705 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 MSH3P20585 1137 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 MMP12P39900 470 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 MAPK9P45984 424 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 ATP13A5Q4VNC0 1218 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PIGGQ5H8A4 983 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PLEKHS1Q5SXH7 462 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 HENMT1Q5T8I9 393 aaKnown RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 RPS27LQ71UM5 84 aaKnown RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 RASGRP3Q8IV61 690 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 TCAIMQ8N3R3 496 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 HMGCLL1Q8TB92 370 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 ITFG1Q8TB96 612 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 HGH1Q9BTY7 390 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 MRPL1Q9BYD6 325 aaKnown RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 BRINP2Q9C0B6 783 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 AKTIPQ9H8T0 292 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 RIC8BQ9NVN3 520 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 POMPQ9Y244 141 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 FNDC3AQ9Y2H6 1198 aaKnown RBP11.79□□□□□ -0.52
PKP4-213ENST00000486254 LRRC42Q9Y546 428 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 PRSS21Q9Y6M0 314 aa11.79□□□□□ -0.52
PKP4-213ENST00000486254 A0A0U1RQS6 177 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 DYTNA2CJ06 578 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 LEFTY1O75610 366 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 WDR47O94967 919 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 SNRPB2P08579 225 aaKnown RBP11.78□□□□□ -0.52
PKP4-213ENST00000486254 UGT1A6P19224 532 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 UGT1A1P22309 533 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 UGT1A4P22310 534 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 AOAHP28039 575 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 UGT1A3P35503 534 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 UGT1A5P35504 534 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 GGT5P36269 586 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 VHLP40337 213 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 PTDSS1P48651 473 aaKnown RBP11.78□□□□□ -0.52
PKP4-213ENST00000486254 ST8SIA6P61647 398 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 B4GALNT1Q00973 533 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 CYP2U1Q7Z449 544 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 SPRED2Q7Z698 418 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 SYVN1Q86TM6 617 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 TMIEQ8NEW7 156 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 LKAAEAR1Q8TD35 194 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 DLG3Q92796 817 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 RCN3Q96D15 328 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 FAM83DQ9H4H8 585 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 WDR41Q9HAD4 459 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 SARS2Q9NP81 518 aaKnown RBP11.78□□□□□ -0.52
PKP4-213ENST00000486254 SEMA4BQ9NPR2 832 aaPredicted RBP11.78□□□□□ -0.52
PKP4-213ENST00000486254 ELOVL2Q9NXB9 296 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 POLG2Q9UHN1 485 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 COL4A3Q01955 1670 aa11.78□□□□□ -0.52
PKP4-213ENST00000486254 ANKRD12Q6UB98 2062 aa11.77□□□□□ -0.52
PKP4-213ENST00000486254 LRRC14BA6NHZ5 514 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 IQCF5A8MTL0 148 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 TTC34A8MYJ7 566 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 AIM2O14862 343 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 TBX10O75333 385 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 TULP3O75386 442 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 CRCPO75575 148 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 KRT36O76013 467 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 ALDOCP09972 364 aaKnown RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 ATP1B2P14415 290 aaPredicted RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 TIMP2P16035 220 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 GPX3P22352 226 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 CA5AP35218 305 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 EIF2DP41214 584 aaKnown RBP11.77□□□□□ -0.53
PKP4-213ENST00000486254 CREB5Q02930 508 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 FOXM1Q08050 763 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 RALGDSQ12967 914 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 ART3Q13508 389 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 LRP8Q14114 963 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 E2F5Q15329 346 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 CCDC6Q16204 474 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 GAB4Q2WGN9 574 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
PKP4-213ENST00000486254 ERAP2Q6P179 960 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms