RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 FCRL5Q96RD9 977 aa18.47■□□□□ 0.55
ABCF3-214ENST00000480562 C10orf88Q9H8K7 445 aa18.47■□□□□ 0.55
ABCF3-214ENST00000480562 CROTQ9UKG9 612 aa18.47■□□□□ 0.55
ABCF3-214ENST00000480562 TFR2Q9UP52 801 aa18.47■□□□□ 0.55
ABCF3-214ENST00000480562 hCG_1818297A0A087WSY0 165 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 GLYATL1P3A0A0U1RQE8 302 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 OR2AG2A6NM03 316 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 AKR1B15C9JRZ8 316 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-214ENST00000480562 MTSS1O43312 755 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 NDUFA10O95299 355 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 PTMSP20962 102 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 PBLDP30039 288 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-214ENST00000480562 MAGEA1P43355 309 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 IL11RAQ14626 422 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 RPE65Q16518 533 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 TFDP3Q5H9I0 405 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 LDLRAP1Q5SW96 308 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 GPRC6AQ5T6X5 926 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 ZDHHC20Q5W0Z9 365 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 TMEM220Q6QAJ8 160 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 GLT6D1Q7Z4J2 308 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 CNGA4Q8IV77 575 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 CCDC50Q8IVM0 306 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 KATNAL2Q8IYT4 538 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 APOBEC4Q8WW27 367 aaKnown RBP18.46■□□□□ 0.55
ABCF3-214ENST00000480562 STAMBPL1Q96FJ0 436 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 QKIQ96PU8 341 aaKnown RBP eCLIP18.46■□□□□ 0.55
ABCF3-214ENST00000480562 EPN3Q9H201 632 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 TSPY26PQ9H489 355 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 HACD3Q9P035 362 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 EPHA6Q9UF33 1036 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 LNPEPQ9UIQ6 1025 aa18.46■□□□□ 0.55
ABCF3-214ENST00000480562 GAPDHSO14556 408 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-214ENST00000480562 KCNJ13O60928 360 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 KATNA1O75449 491 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 SPAG6O75602 509 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 ZRANB2O95218 330 aaKnown RBP eCLIP18.45■□□□□ 0.54
ABCF3-214ENST00000480562 FGF5P12034 268 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 HLA-DPA1P20036 260 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 DMPKQ09013 629 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 TBX2Q13207 712 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-214ENST00000480562 MPP3Q13368 585 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 NFE2L1Q14494 772 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 RCOR2Q8IZ40 523 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 BEND7Q8N7W2 519 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-214ENST00000480562 DDHD1Q8NEL9 900 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 DTX3LQ8TDB6 740 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 NAT14Q8WUY8 206 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 ABHD17AQ96GS6 310 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 VAT1Q99536 393 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 HEMGNQ9BXL5 484 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 ZCCHC2Q9C0B9 1178 aaKnown RBP18.45■□□□□ 0.54
ABCF3-214ENST00000480562 RSPH14Q9UHP6 348 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 PKP3Q9Y446 797 aa18.45■□□□□ 0.54
ABCF3-214ENST00000480562 IGHV5-51A0A0C4DH38 117 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 AGTP01019 485 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 NELFEP18615 380 aaKnown RBP18.44■□□□□ 0.54
ABCF3-214ENST00000480562 FECHP22830 423 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 HADHBP55084 474 aaKnown RBP18.44■□□□□ 0.54
ABCF3-214ENST00000480562 ERV3-1Q14264 604 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 KCNAB1Q14722 419 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 CRTC2Q53ET0 693 aaPredicted RBP18.44■□□□□ 0.54
ABCF3-214ENST00000480562 COLEC12Q5KU26 742 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 DET1Q7L5Y6 550 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 KRT35Q92764 455 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 COL26A1Q96A83 441 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 FICDQ9BVA6 458 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 FSD1LQ9BXM9 530 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 RAB33BQ9H082 229 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.44■□□□□ 0.54
ABCF3-214ENST00000480562 PCDHB3Q9Y5E6 796 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 ARL5AQ9Y689 179 aa18.44■□□□□ 0.54
ABCF3-214ENST00000480562 CFAP20Q9Y6A4 193 aaKnown RBP18.44■□□□□ 0.54
ABCF3-214ENST00000480562 STX7O15400 261 aaKnown RBP18.43■□□□□ 0.54
ABCF3-214ENST00000480562 TIAF1O95411 115 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 FURINP09958 794 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 FOLR1P15328 257 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 AKT1P31749 480 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 ITGA9Q13797 1035 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 PLCL1Q15111 1095 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 SKOR2Q2VWA4 1001 aaPredicted RBP18.43■□□□□ 0.54
ABCF3-214ENST00000480562 FNBP1LQ5T0N5 605 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 CERS6Q6ZMG9 384 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 PPP1R3BQ86XI6 285 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 ZNF398Q8TD17 642 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 GORASP1Q9BQQ3 440 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 IMP3Q9NV31 184 aaKnown RBP18.43■□□□□ 0.54
ABCF3-214ENST00000480562 FAM8A1Q9UBU6 413 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 TRHDEQ9UKU6 1024 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 DNMT3AQ9Y6K1 912 aaPredicted RBP18.43■□□□□ 0.54
ABCF3-214ENST00000480562 FLNCQ14315 2725 aa18.43■□□□□ 0.54
ABCF3-214ENST00000480562 COL12A1Q99715 3063 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 HACD1B0YJ81 288 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 H7C0C1 242 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 CCNYL3P0C7X3 344 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 MSH3P20585 1137 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 RBL1P28749 1068 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 CASRP41180 1078 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 ATP5OP48047 213 aa18.42■□□□□ 0.54
ABCF3-214ENST00000480562 XRCC4Q13426 336 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms