RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 GMEB2Q9UKD1 530 aa6.13□□□□□ -1.43
PBRM1-220ENST00000480064 CCDC180Q9P1Z9 1646 aa6.13□□□□□ -1.43
PBRM1-220ENST00000480064 TRBV5-7A0A0A0MS05 114 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 A0A1W2PPM1 405 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 PIPSLA2A3N6 862 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 TMEM8BA6NDV4 472 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 SDR42E2A6NKP2 422 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 NDUFS4O43181 175 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 HSF2BPO75031 334 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 MED24O75448 989 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 CREG1O75629 220 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 SLC16A8O95907 504 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 ABHD2P08910 425 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 NR4A1P22736 598 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 ZFP36P26651 326 aaKnown RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 PTGS2P35354 604 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 MAD2L1Q13257 205 aaPredicted RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 TRA2AQ13595 282 aaKnown RBP eCLIP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 C2orf68Q2NKX9 166 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 IQCCQ4KMZ1 466 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 FNDC1Q4ZHG4 1894 aaPredicted RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 TTC39AQ5SRH9 613 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 ZDHHC20Q5W0Z9 365 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 PLEKHA7Q6IQ23 1121 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 RBM43Q6ZSC3 357 aaKnown RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 KDM8Q8N371 416 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 SLC25A41Q8N5S1 370 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 HORMAD2Q8N7B1 307 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 CEP76Q8TAP6 659 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 NSMAFQ92636 917 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 OTUB1Q96FW1 271 aaPredicted RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 CLMNQ96JQ2 1002 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 KLHL5Q96PQ7 755 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 OSBPL8Q9BZF1 889 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 WNT5BQ9H1J7 359 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 PPIL3Q9H2H8 161 aaKnown RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 ACSS1Q9NUB1 689 aaPredicted RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 TBC1D7Q9P0N9 293 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 CGNQ9P2M7 1197 aaKnown RBP6.12□□□□□ -1.43
PBRM1-220ENST00000480064 RCOR1Q9UKL0 485 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 FZD1Q9UP38 647 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 HS3ST3A1Q9Y663 406 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 SLC4A4Q9Y6R1 1079 aa6.12□□□□□ -1.43
PBRM1-220ENST00000480064 ARHGEF40Q8TER5 1519 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 NPHP3Q7Z494 1330 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 WIPF3A6NGB9 483 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 FOXO6A8MYZ6 492 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 M0QZ24 198 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 MEIS2O14770 477 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 RASGRF2O14827 1237 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 SELENOFO60613 162 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 PEX11AO75192 247 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 KCNK5O95279 499 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 RAB40ALP0C0E4 278 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 CCND3P30281 292 aaPredicted RBP6.11□□□□□ -1.43
PBRM1-220ENST00000480064 METAP2P50579 478 aaKnown RBP eCLIP6.11□□□□□ -1.43
PBRM1-220ENST00000480064 TMPRSS3P57727 454 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 ADORA2A-AS1P86434 159 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 CDK3Q00526 305 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 SPOCK1Q08629 439 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 NR1D2Q14995 579 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 PRKD1Q15139 912 aaPredicted RBP6.11□□□□□ -1.43
PBRM1-220ENST00000480064 AARDQ4LEZ3 155 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 KLHL26Q53HC5 615 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.11□□□□□ -1.43
PBRM1-220ENST00000480064 TSTD2Q5T7W7 516 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 MFSD7Q6UXD7 560 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 EXOC3L1Q86VI1 746 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 ARHGEF25Q86VW2 580 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 SIAH3Q8IW03 269 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 BATF2Q8N1L9 274 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 DENND6BQ8NEG7 585 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 AGBL3Q8NEM8 1001 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 AP2M1Q96CW1 435 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 CDCA5Q96FF9 252 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 SFXN2Q96NB2 322 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 MUS81Q96NY9 551 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 TM2D2Q9BX73 214 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 PPP1R3EQ9H7J1 279 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 TBC1D17Q9HA65 648 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 DNAJC11Q9NVH1 559 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 CCPG1Q9ULG6 757 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 TTC7AQ9ULT0 858 aaPredicted RBP6.11□□□□□ -1.43
PBRM1-220ENST00000480064 EXOC7Q9UPT5 735 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 STRAPQ9Y3F4 350 aaKnown RBP6.11□□□□□ -1.43
PBRM1-220ENST00000480064 STON1Q9Y6Q2 735 aa6.11□□□□□ -1.43
PBRM1-220ENST00000480064 TRBV2A0A0J9YWF9 115 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 TCRBV5S1A1TA0A578 114 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 SLC22A23A1A5C7 686 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 POC1B-GALNT4F8VUJ3 575 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 CACNB4O00305 520 aaPredicted RBP6.1□□□□□ -1.43
PBRM1-220ENST00000480064 SSX4O60224 188 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 LUC7L3O95232 432 aaKnown RBP6.1□□□□□ -1.43
PBRM1-220ENST00000480064 SERPING1P05155 500 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 CHRM5P08912 532 aaPredicted RBP6.1□□□□□ -1.43
PBRM1-220ENST00000480064 MYL6BP14649 208 aa6.1□□□□□ -1.43
PBRM1-220ENST00000480064 DDX5P17844 614 aaKnown RBP6.1□□□□□ -1.43
PBRM1-220ENST00000480064 VCLP18206 1134 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms