RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 RGMBQ6NW40 437 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 CERS6Q6ZMG9 384 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 ZNF783Q6ZMS7 281 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 RNF165Q6ZSG1 346 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 CLVS1Q8IUQ0 354 aaPredicted RBP24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 CPNE9Q8IYJ1 553 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 CARNMT1Q8N4J0 409 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 OR8J3Q8NGG0 315 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 TMEM74Q96NL1 305 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 TUBA1CQ9BQE3 449 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 INTS7Q9NVH2 962 aaKnown RBP24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 ZNF711Q9Y462 761 aa24.31■■□□□ 1.48
SYNGAP1-206ENST00000479510 PRSS23O95084 383 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 JAK1P23458 1154 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 CACNG1Q06432 222 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 CCNYL2Q5T2Q4 361 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 ANKS3Q6ZW76 656 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 ABI1Q8IZP0 508 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 LRRC43Q8N309 656 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 SFRP1Q8N474 314 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 MARCH5Q9NX47 278 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 DEAF1O75398 565 aaPredicted RBP24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 S100BP04271 92 aaPredicted RBP24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 VARSP26640 1264 aaKnown RBP24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 PWP1Q13610 501 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 GLYATQ6IB77 296 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 LETMD1Q6P1Q0 360 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 FUT10Q6P4F1 479 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 SCIMPQ6UWF3 145 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 RSPO2Q6UXX9 243 aaPredicted RBP24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 METTL6Q8TCB7 284 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 EXOC2Q96KP1 924 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 CCDC115Q96NT0 180 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 C19orf43Q9BQ61 176 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 TRIM8Q9BZR9 551 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 NACA2Q9H009 215 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 SLAMF8Q9P0V8 285 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 PCDHGC4Q9Y5F7 938 aa24.3■■□□□ 1.48
SYNGAP1-206ENST00000479510 OTCP00480 354 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 SLC10A3P09131 477 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 CCND3P30281 292 aaPredicted RBP24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 CASP2P42575 452 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 SREBF2Q12772 1141 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 OR52B6Q8NGF0 335 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 GIPC2Q8TF65 315 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 FBXL20Q96IG2 436 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 CGREF1Q99674 301 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 ZNHIT2Q9UHR6 403 aa24.29■■□□□ 1.48
SYNGAP1-206ENST00000479510 ATF6P18850 670 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 DCKP27707 260 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 HLCSP50747 726 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 OR4D2P58180 307 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 GPR162Q16538 588 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 HECTD3Q5T447 861 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 NCEH1Q6PIU2 408 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 SLC2A7Q6PXP3 512 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 CYP20A1Q6UW02 462 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 FRA10AC1Q70Z53 315 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 RNF180Q86T96 592 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 PDPRQ8NCN5 879 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 MAGEE2Q8TD90 523 aaPredicted RBP24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 B3GALT6Q96L58 329 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 PPP3R2Q96LZ3 170 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 RDH12Q96NR8 316 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 OSBPL6Q9BZF3 934 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 CXorf21Q9HAI6 301 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 TMEM9Q9P0T7 183 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 AP3M1Q9Y2T2 418 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 PKP3Q9Y446 797 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 ASB1Q9Y576 335 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 CBX4O00257 560 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 PRMT5O14744 637 aaPredicted RBP24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 ANKRD28O15084 1053 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 LSM1O15116 133 aaKnown RBP24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 CAPN1P07384 714 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 RAP2AP10114 183 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 ACLYP53396 1101 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 TRAF2Q12933 501 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 DENND1CQ8IV53 801 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 PLGRKTQ9HBL7 147 aa24.28■■□□□ 1.48
SYNGAP1-206ENST00000479510 RAD51BO15315 384 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 CA12O43570 354 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 HPRP00739 348 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 ALBP02768 609 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 ANXA6P08133 673 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 RPS3P23396 243 aaKnown RBP eCLIP24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 FAM98BQ52LJ0 330 aaKnown RBP24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 METTL2BQ6P1Q9 378 aaKnown RBP24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 IL27RAQ6UWB1 636 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 GOLGA7Q7Z5G4 137 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 EFHBQ8N7U6 833 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 C12orf43Q96C57 262 aaKnown RBP24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 VPS50Q96JG6 964 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 RNF145Q96MT1 663 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 ARHGAP39Q9C0H5 1083 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 IL17CQ9P0M4 197 aa24.27■■□□□ 1.48
SYNGAP1-206ENST00000479510 TRIM64BA6NI03 449 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GMNNO75496 209 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GLUD1P00367 558 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GGT1P19440 569 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms