RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	ZNF711	Q9Y462	761 aa		13.91	□□□□□ -0.18
RC3H2-208	ENST00000478216	SHANK1	Q9Y566	2161 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	CEACAM4	O75871	244 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	CD48	P09326	243 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	ATXN8OS	P0DMR3	200 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	GZMA	P12544	262 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	MX2	P20592	715 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	PBLD	P30039	288 aa	Predicted RBP	13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	KLHL30	Q0D2K2	578 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	FAM69B	Q5VUD6	431 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	LYPLAL1	Q5VWZ2	237 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	IZUMO3	Q5VZ72	239 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	WASH2P	Q6VEQ5	465 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	MED25	Q71SY5	747 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	OOSP2	Q86WS3	158 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	TICAM1	Q8IUC6	712 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	ZNF547	Q8IVP9	402 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	KCTD6	Q8NC69	237 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	OR8K5	Q8NH50	307 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	SNRNP40	Q96DI7	357 aa	Known RBP	13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	BTBD6	Q96KE9	485 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	HRASLS2	Q9NWW9	162 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	ANAPC7	Q9UJX3	599 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	TCFL5	Q9UL49	500 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	MYO6	Q9UM54	1294 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	WDR37	Q9Y2I8	494 aa		13.9	□□□□□ -0.18
RC3H2-208	ENST00000478216	CACNA1D	Q01668	2161 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	ARHGAP10	A1A4S6	786 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	KCNK1	O00180	336 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	DDX3Y	O15523	660 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	ZBTB11	O95625	1053 aa	Predicted RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	ALPP	P05187	535 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	CYP2A7	P20853	494 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	OTX2	P32243	289 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	ARCN1	P48444	511 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	SLC25A11	Q02978	314 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	ATP1A4	Q13733	1029 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	PAFAH1B3	Q15102	231 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	KHDC1	Q4VXA5	237 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	VWA5B1	Q5TIE3	1220 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	C1QL3	Q5VWW1	255 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	HGSNAT	Q68CP4	663 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	CCDC70	Q6NSX1	233 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	AMZ2	Q86W34	360 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	RAB43	Q86YS6	212 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	D2HGDH	Q8N465	521 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	TLR10	Q9BXR5	811 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	BPIFA1	Q9NP55	256 aa		13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	CFAP20	Q9Y6A4	193 aa	Known RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.89	□□□□□ -0.19
RC3H2-208	ENST00000478216	OR5K3	A6NET4	321 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216		C9J4A7	227 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	MEN1	O00255	615 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	DDX3X	O00571	662 aa	Known RBP eCLIP	13.88	□□□□□ -0.19	3e-9	■■■■□ 22.3
RC3H2-208	ENST00000478216	MAP3K7	O43318	606 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	CBX6	O95503	412 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	RAB40AL	P0C0E4	278 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	BPI	P17213	487 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	ITGA1	P56199	1179 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	PRKAA1	Q13131	559 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	LAMB3	Q13751	1172 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	DPYSL3	Q14195	570 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	KRT33B	Q14525	404 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	RPE65	Q16518	533 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	PRAMEF17	Q5VTA0	474 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	SASS6	Q6UVJ0	657 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	ADAMTS17	Q8TE56	1095 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	EID2B	Q96D98	161 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	TSGA13	Q96PP4	275 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	NLN	Q9BYT8	704 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	CEP41	Q9BYV8	373 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	MAGEE1	Q9HCI5	957 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	SEMA5B	Q9P283	1151 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	FAM8A1	Q9UBU6	413 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	B3GNT3	Q9Y2A9	372 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	PADI2	Q9Y2J8	665 aa		13.88	□□□□□ -0.19
RC3H2-208	ENST00000478216	OR6C74	A6NCV1	312 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	WIPF3	A6NGB9	483 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	MMP2	P08253	660 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	MTHFD1	P11586	935 aa	Known RBP	13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	CDH3	P22223	829 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	PER3	P56645	1201 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	GBE1	Q04446	702 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	TMEM115	Q12893	351 aa	Predicted RBP	13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	PPP2R5E	Q16537	467 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	CCDC183	Q5T5S1	534 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	LCN10	Q6JVE6	187 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	FBXO38	Q6PIJ6	1188 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	MAP7D3	Q8IWC1	876 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	SYTL1	Q8IYJ3	562 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	DSEL	Q8IZU8	1212 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	NIPA2	Q8N8Q9	360 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	GLIS1	Q8NBF1	620 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	SLC38A9	Q8NBW4	561 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	CLEC1A	Q8NC01	280 aa		13.87	□□□□□ -0.19
RC3H2-208	ENST00000478216	TM9SF4	Q92544	642 aa		13.87	□□□□□ -0.19

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