RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ZFYVE26Q68DK2 2539 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 TCRBV7S3A2A0A539 114 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 KMOO15229 486 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 VEGFDO43915 354 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 POP7O75817 140 aaKnown RBP17.35■□□□□ 0.37
PTPN7-209ENST00000477554 SLC19A1P41440 591 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 FASLGP48023 281 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 UBE2IP63279 158 aaKnown RBP17.35■□□□□ 0.37
PTPN7-209ENST00000477554 HHEXQ03014 270 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 TRIP13Q15645 432 aaPredicted RBP17.35■□□□□ 0.37
PTPN7-209ENST00000477554 COL28A1Q2UY09 1125 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 MAP9Q49MG5 647 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 FNBP1LQ5T0N5 605 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 SLC46A1Q96NT5 459 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 ERP44Q9BS26 406 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 RAB6BQ9NRW1 208 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 SMOXQ9NWM0 555 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 ASIC3Q9UHC3 531 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 PSMD13Q9UNM6 376 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 SLC30A1Q9Y6M5 507 aa17.35■□□□□ 0.37
PTPN7-209ENST00000477554 IGHV5-10-1A0A0J9YXX1 117 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 AGAP14A8MT82 685 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 NDC80O14777 642 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 TNFSF15O95150 251 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 RHOXF2BP0C7M4 288 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 AKT1P31749 480 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 MC4RP32245 332 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 SEMA5AQ13591 1074 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 PHF19Q5T6S3 580 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 MGAQ8IWI9 3026 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 GPR150Q8NGU9 434 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 DTX3LQ8TDB6 740 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 LRRC45Q96CN5 670 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 CCDC74BQ96LY2 380 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 PPP1R2P1Q96PQ5 205 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 NRTNQ99748 197 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 RHOXF2Q9BQY4 288 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 TIMM29Q9BSF4 260 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 KCNK4Q9NYG8 393 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 OGFRQ9NZT2 677 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 CPNE7Q9UBL6 633 aa17.34■□□□□ 0.37
PTPN7-209ENST00000477554 SMG1Q96Q15 3661 aaKnown RBP17.34■□□□□ 0.37
PTPN7-209ENST00000477554 CCDC187A0A096LP49 1063 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 MROH6A6NGR9 719 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 CRTAMO95727 393 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 CCL4P13236 92 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 CCKBRP32239 447 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 FDFT1P37268 417 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 MAPK9P45984 424 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 CLCNKAP51800 687 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 CRADDP78560 199 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 SLC7A5Q01650 507 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 GPS1Q13098 491 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 ITGA9Q13797 1035 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 LDLRAP1Q5SW96 308 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 DUS1LQ6P1R4 473 aaKnown RBP17.33■□□□□ 0.36
PTPN7-209ENST00000477554 RAB11FIP2Q7L804 512 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 OR13J1Q8NGT2 312 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 FGF11Q92914 225 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 RNF31Q96EP0 1072 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 LIN37Q96GY3 246 aaPredicted RBP17.33■□□□□ 0.36
PTPN7-209ENST00000477554 TRIM51Q9BSJ1 452 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 NLE1Q9NVX2 485 aaPredicted RBP17.33■□□□□ 0.36
PTPN7-209ENST00000477554 LOXL2Q9Y4K0 774 aa17.33■□□□□ 0.36
PTPN7-209ENST00000477554 CFAP20Q9Y6A4 193 aaKnown RBP17.33■□□□□ 0.36
PTPN7-209ENST00000477554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 PDZK1P1A8MUH7 402 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 CDRT15L2A8MXV6 281 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 GPR89AB7ZAQ6 455 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 PPFIA2O75334 1257 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 DXOO77932 396 aaKnown RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 SUN1O94901 812 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 CPNE6O95741 557 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 GPR89BP0CG08 455 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 MRPS25P82663 173 aaKnown RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 SRSF6Q13247 344 aaKnown RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 BIRC2Q13490 618 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 ZDHHC20Q5W0Z9 365 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 DUPD1Q68J44 220 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 ZNF534Q76KX8 674 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 PCGF5Q86SE9 256 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 PIM3Q86V86 326 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 NXPE1Q8N323 547 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 FBXO39Q8N4B4 442 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 BBOF1Q8ND07 529 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 SPDYE1Q8NFV5 336 aaPredicted RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 WDR36Q8NI36 951 aaKnown RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 SNIP1Q8TAD8 396 aaKnown RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 WDR48Q8TAF3 677 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 CDKN2AIPNLQ96HQ2 116 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 SLC38A3Q99624 504 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 SARS2Q9NP81 518 aaKnown RBP17.32■□□□□ 0.36
PTPN7-209ENST00000477554 CASS4Q9NQ75 786 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 PISDQ9UG56 409 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 CRLS1Q9UJA2 301 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 PRSS21Q9Y6M0 314 aa17.32■□□□□ 0.36
PTPN7-209ENST00000477554 A0A087WV48 116 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 CCDC162PA2VCL2 907 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 PLD2O14939 933 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 APRTP07741 180 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms