RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TUBGCP5Q96RT8 1024 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 DGCR6LQ9BY27 220 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 VPS4AQ9UN37 437 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ADAMTSL1Q8N6G6 1762 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CCDC189A1A4V9 331 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PDZK1P1A8MUH7 402 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 G3V2L1 256 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ZNF37AP17032 561 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 MTHFRP42898 656 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ATP4BP51164 291 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 LYSMD3Q7Z3D4 306 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ADGRG6Q86SQ4 1221 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 C3orf58Q8NDZ4 430 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 BPIFB6Q8NFQ5 453 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CSNK1G1Q9HCP0 422 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 GALPQ9UBC7 116 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 MAN1A2O60476 641 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 S1PR4O95977 384 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 IL6P05231 212 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 C8GP07360 202 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PRPS2P11908 318 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 EEFSECP57772 596 aaKnown RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 NAPRTQ6XQN6 538 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PAQR9Q6ZVX9 377 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ARHGAP22Q7Z5H3 698 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 TRIM48Q8IWZ4 208 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PGBD3Q8N328 593 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 NAT16Q8N8M0 369 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ZNF461Q8TAF7 563 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 SLC13A3Q8WWT9 602 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 RPL10LQ96L21 214 aaKnown RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 PTPN18Q99952 460 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 C1orf109Q9NX04 203 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CACNA2D2Q9NY47 1150 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 K7EPI3 171 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ENPP3O14638 875 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ATG13O75143 517 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 SCELO95171 688 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 FOXM1Q08050 763 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ZNF534Q76KX8 674 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 R3HCC1LQ7Z5L2 792 aaKnown RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 LIX1Q8N485 282 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 OR9I1Q8NGQ6 314 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CSGALNACT1Q8TDX6 532 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 SNRNP27Q8WVK2 155 aaKnown RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 GPR62Q9BZJ7 368 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CXCL16Q9H2A7 254 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 ZIM2Q9NZV7 527 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 CNOT6Q9ULM6 557 aaKnown RBP14.45□□□□□ -0.1
HDAC6-220ENST00000477528 GMPPBQ9Y5P6 360 aa14.45□□□□□ -0.1
HDAC6-220ENST00000477528 C1QTNF3-AMACRE9PGA6 284 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 STX16O14662 325 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 CCL16O15467 120 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 NCK1P16333 377 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 ST13P50502 369 aaKnown RBP14.44□□□□□ -0.1
HDAC6-220ENST00000477528 RHDQ02161 417 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 SERPINA13PQ6UXR4 307 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 LRRC3Q9BY71 257 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 GALTP07902 379 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 ALPIP09923 528 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 MAPK10P53779 464 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 CYP4F8P98187 520 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 CROCCP3Q8IVE0 287 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 KHSRPQ92945 711 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDAC6-220ENST00000477528 ELAC1Q9H777 363 aaKnown RBP14.44□□□□□ -0.1
HDAC6-220ENST00000477528 CDK5RAP2Q96SN8 1893 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 GNAZP19086 355 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 SERPINB1P30740 379 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 GSSP48637 474 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 EEF1AKMT1Q8WVE0 214 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 SGK2Q9HBY8 427 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 SAMHD1Q9Y3Z3 626 aaKnown RBP14.44□□□□□ -0.1
HDAC6-220ENST00000477528 MAGEA3P43357 314 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 CAPN13Q6MZZ7 669 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-220ENST00000477528 ERICH5Q6P6B1 374 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 SCD5Q86SK9 330 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 TMEM126BQ8IUX1 230 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 RHEBL1Q8TAI7 183 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 ADI1Q9BV57 179 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 ATG10Q9H0Y0 220 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 SPACA6W5XKT8 324 aa14.44□□□□□ -0.1
HDAC6-220ENST00000477528 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-220ENST00000477528 ADH1CP00326 375 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 CD1DP15813 335 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 SOX6P35712 828 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 PGGT1BP53609 377 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 CPTPQ5TA50 214 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 PLPP4Q5VZY2 271 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 SAPCD2Q86UD0 394 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 CANT1Q8WVQ1 401 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 OR8D1Q8WZ84 308 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 PROX1Q92786 737 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 KCNJ9Q92806 393 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 CDK15Q96Q40 435 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 PKP2Q99959 881 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 SLC39A3Q9BRY0 314 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 NLNQ9BYT8 704 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 TRBC1P01850 177 aa14.43□□□□□ -0.1
HDAC6-220ENST00000477528 C8AP07357 584 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms