RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PCTPQ9UKL6 214 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SAMD4AQ9UPU9 718 aaKnown RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 ATP11BQ9Y2G3 1177 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TSC22D4Q9Y3Q8 395 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SNX10Q9Y5X0 201 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 CROCCQ5TZA2 2017 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 LOC100130705A0A1B0GUX0 176 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 FAM220BPB1ANY3 271 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 AURKAO14965 403 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 BCAS1O75363 584 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 ERN1O75460 977 aaKnown RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 ECI2O75521 394 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 RSL1D1O76021 490 aaKnown RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 CHRNA1P02708 482 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ALDH2P05091 517 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 BMP1P13497 986 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MTHFD2P13995 350 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 SMPD1P17405 629 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 BDNFP23560 247 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 HRH2P25021 359 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MAPK1P28482 360 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 RGS4P49798 205 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 HUNKP57058 714 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 DEFA1P59665 94 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 DEFA3P59666 94 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 CTBSQ01459 385 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TAF1AQ15573 450 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 INAQ16352 499 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ANKDD1AQ495B1 522 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ZNF789Q5FWF6 425 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ZNF691Q5VV52 312 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 XAF1Q6GPH4 301 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MSANTD1Q6ZTZ1 278 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 P2RY8Q86VZ1 359 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PLD3Q8IV08 490 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 KIAA2013Q8IYS2 634 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 ARL10Q8N8L6 244 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TBATAQ96M53 351 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TINF2Q9BSI4 451 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 AP5M1Q9H0R1 490 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 TUBB1Q9H4B7 451 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 AKIP1Q9NQ31 210 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 POLR3BQ9NW08 1133 aaPredicted RBP6.05□□□□□ -1.44
HERC4-209ENST00000473533 FZD1Q9UP38 647 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 Q9Y3F1 56 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 PCDHB1Q9Y5F3 818 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 HS3ST4Q9Y661 456 aa6.05□□□□□ -1.44
HERC4-209ENST00000473533 MCM3APO60318 1980 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 ANKRD36A6QL64 1941 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PNMA8CA0A1B0GUJ8 204 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 KRBA1A5PL33 1030 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 E5RI56 91 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 H3BMM5 538 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 SLC1A7O00341 560 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 BTN3A1O00481 513 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 BCKDKO14874 412 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 RAD51BO15315 384 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 SIX3O95343 332 aaPredicted RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 PKMP14618 531 aaKnown RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 NCK1P16333 377 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 TSPAN8P19075 237 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 ELK4P28324 431 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 DIO3P55073 304 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 UFM1P61960 85 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 GNA12Q03113 381 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 CDC20Q12834 499 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 SERINC3Q13530 473 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PCBP2Q15366 365 aaKnown RBP eCLIP6.04□□□□□ -1.442e-10■□□□□ 9.6
HERC4-209ENST00000473533 NR6A1Q15406 480 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 NFE2Q16621 373 aaPredicted RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 MAPKAPK3Q16644 382 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 ZNF181Q2M3W8 571 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PAGE3Q5JUK9 113 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 TMEM214Q6NUQ4 689 aaKnown RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 TMEM207Q6UWW9 146 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PLEKHG7Q6ZR37 379 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 KDELC2Q7Z4H8 507 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 LGI2Q8N0V4 545 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 TMEM132CQ8N3T6 1108 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 BLOC1S5Q8TDH9 187 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 SLC13A3Q8WWT9 602 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PDLIM5Q96HC4 596 aaKnown RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 FUBP3Q96I24 572 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERC4-209ENST00000473533 CCDC90BQ9GZT6 254 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 KATNBL1Q9H079 304 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 GABARAPL1Q9H0R8 117 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 RNF39Q9H2S5 420 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 FAM105AQ9NUU6 356 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PAK1IP1Q9NWT1 392 aaPredicted RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 LIMD1Q9UGP4 676 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 ADGRE2Q9UHX3 823 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 HEMK1Q9Y5R4 338 aaPredicted RBP6.04□□□□□ -1.44
HERC4-209ENST00000473533 TRPV2Q9Y5S1 764 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 OTOFQ9HC10 1997 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 GPR182O15218 404 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 HS6ST1O60243 411 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 PRKD3O94806 890 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 ANGPTL1O95841 491 aa6.04□□□□□ -1.44
HERC4-209ENST00000473533 MOCS2O96007 188 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms