RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 NUP85Q9BW27 656 aa3.97□□□□□ -1.77
PRPF3-204ENST00000470824 NOL11Q9H8H0 719 aaKnown RBP3.97□□□□□ -1.77
PRPF3-204ENST00000470824 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
PRPF3-204ENST00000470824 MRGBPQ9NV56 204 aa3.97□□□□□ -1.77
PRPF3-204ENST00000470824 C1RLQ9NZP8 487 aa3.97□□□□□ -1.77
PRPF3-204ENST00000470824 NFS1Q9Y697 457 aa3.97□□□□□ -1.77
PRPF3-204ENST00000470824 COL3A1P02461 1466 aaPredicted RBP3.97□□□□□ -1.77
PRPF3-204ENST00000470824 FANCD2Q9BXW9 1451 aa3.97□□□□□ -1.77
PRPF3-204ENST00000470824 PTPRCP08575 1304 aa3.96□□□□□ -1.77
PRPF3-204ENST00000470824 PRAG1Q86YV5 1406 aa3.96□□□□□ -1.77
PRPF3-204ENST00000470824 IGLV5-52A0A0A0MRZ9 124 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 SSX4O60224 188 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 TSPAN1O60635 241 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 RECQL5O94762 991 aaPredicted RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 CLDN14O95500 239 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 FDPSP14324 419 aaKnown RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 IFNAR1P17181 557 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 DNASE1P24855 282 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 PTAFRP25105 342 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 ZNF75DP51815 510 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 TERF1P54274 439 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 CD81P60033 236 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 BNC1Q01954 994 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 TRAF3Q13114 568 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 SCARB2Q14108 478 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 NR1D2Q14995 579 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 ALS2CLQ60I27 953 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 FAM109BQ6ICB4 259 aaPredicted RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 ERN2Q76MJ5 926 aaKnown RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 ATG9AQ7Z3C6 839 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 TMEM173Q86WV6 379 aaPredicted RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 RNF113BQ8IZP6 322 aaKnown RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 CLIP4Q8N3C7 705 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 PI4KAP1Q8N8J0 262 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 OR5R1Q8NH85 324 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 EXD1Q8NHP7 514 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 SLC44A1Q8WWI5 657 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 TANKQ92844 425 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 PIGTQ969N2 578 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 ERLEC1Q96DZ1 483 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 LINC00615Q96LM1 132 aaPredicted RBP3.96□□□□□ -1.78
PRPF3-204ENST00000470824 FER1L6-AS2Q96M78 137 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 TTC14Q96N46 770 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 SLC25A23Q9BV35 468 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 C1QTNF7Q9BXJ2 289 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 STK26Q9P289 416 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 PCDHA7Q9UN72 937 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 AMDHD2Q9Y303 409 aa3.96□□□□□ -1.78
PRPF3-204ENST00000470824 URB2Q14146 1524 aaKnown RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 A0A0B4J293 547 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 A0A1W2PP11 408 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 MYMKA6NI61 221 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 CD8B2A6NJW9 211 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PLK4O00444 970 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SPRY1O43609 319 aaPredicted RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 S1PR1P21453 382 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 CORO1AP31146 461 aaKnown RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 GABRA5P31644 462 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PCGF2P35227 344 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 GP5P40197 560 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 COG7P83436 770 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 CDK3Q00526 305 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PPARDQ03181 441 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 ZNF155Q12901 538 aaPredicted RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 HSPB3Q12988 150 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PTPRCAPQ14761 206 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 CCDC184Q52MB2 194 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 TRNP1Q6NT89 227 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 ZNF549Q6P9A3 640 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 FIGLAQ6QHK4 219 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 CENPVQ7Z7K6 275 aaPredicted RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 METTL23Q86XA0 190 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 ADHFE1Q8IWW8 467 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 ATP6V1E2Q96A05 226 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 NXNL1Q96CM4 212 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SCMH1Q96GD3 660 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PRMT6Q96LA8 375 aaPredicted RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 FAM81BQ96LP2 452 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SPAG5Q96R06 1193 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 OR6C1Q96RD1 312 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 PCYT2Q99447 389 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 NTPCRQ9BSD7 190 aaKnown RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 ST6GALNAC4Q9H4F1 302 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 CNOT10Q9H9A5 744 aaKnown RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 MRPL44Q9H9J2 332 aaKnown RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 GRPEL1Q9HAV7 217 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 HHATLQ9HCP6 504 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 EQTNQ9NQ60 294 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SMARCAL1Q9NZC9 954 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SLC24A2Q9UI40 661 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SIX4Q9UIU6 781 aa3.95□□□□□ -1.78
PRPF3-204ENST00000470824 SOS1Q07889 1333 aaPredicted RBP3.95□□□□□ -1.78
PRPF3-204ENST00000470824 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
PRPF3-204ENST00000470824 OR2M5A3KFT3 312 aa3.94□□□□□ -1.78
PRPF3-204ENST00000470824 LILRA5A6NI73 299 aa3.94□□□□□ -1.78
PRPF3-204ENST00000470824 TO15178 435 aa3.94□□□□□ -1.78
PRPF3-204ENST00000470824 MID1O15344 667 aa3.94□□□□□ -1.78
PRPF3-204ENST00000470824 BUD23O43709 281 aaKnown RBP3.94□□□□□ -1.78
PRPF3-204ENST00000470824 KDM4BO94953 1096 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms