RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CHST15Q7LFX5 561 aaPredicted RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 ZC3HC1Q86WB0 502 aaKnown RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 MINDY1Q8N5J2 469 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 UHMK1Q8TAS1 419 aaKnown RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 HNRNPLLQ8WVV9 542 aaKnown RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 LRRC61Q9BV99 259 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 TMEM168Q9H0V1 697 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 TCEAL2Q9H3H9 227 aaPredicted RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 ARGLU1Q9NWB6 273 aaPredicted RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 FETUBQ9UGM5 382 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 PCYT1BQ9Y5K3 369 aaPredicted RBP14.97□□□□□ -0.01
SNIP1-202ENST00000468040 IKBKGQ9Y6K9 419 aa14.97□□□□□ -0.01
SNIP1-202ENST00000468040 NEMP2A6NFY4 417 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 MGAT4DA6NG13 374 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 E5RI56 91 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 SCAMP1O15126 338 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 KPNA5O15131 536 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 AQP9O43315 295 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 INHBAP08476 426 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 F7P08709 466 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 ZNF883P0CG24 379 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 EPHA8P29322 1005 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 PBLDP30039 288 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 SPRP35270 261 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 CLCNKAP51800 687 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 DMPKQ09013 629 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 SF3A2Q15428 464 aaKnown RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 UAP1Q16222 522 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 PLA2G4EQ3MJ16 856 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 PRR23CQ6ZRP0 262 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 C11orf96Q7Z7L8 435 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 CNPY4Q8N129 248 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 BEND7Q8N7W2 519 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 ZNF548Q8NEK5 533 aaPredicted RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 OR2L2Q8NH16 312 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 HM13Q8TCT9 377 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 GPBAR1Q8TDU6 330 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 LMX1AQ8TE12 382 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 NAT14Q8WUY8 206 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 SLC44A1Q8WWI5 657 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 KCNJ9Q92806 393 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 VPS39Q96JC1 886 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 RBBP8Q99708 897 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 MCMBPQ9BTE3 642 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 AARSD1Q9BTE6 412 aaKnown RBP14.96□□□□□ -0.01
SNIP1-202ENST00000468040 PPCSQ9HAB8 311 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 CSNK1G3Q9Y6M4 447 aa14.96□□□□□ -0.01
SNIP1-202ENST00000468040 RALGAPA1Q6GYQ0 2036 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 TMEM131Q92545 1883 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 USP34Q70CQ2 3546 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 VPS13AQ96RL7 3174 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 IQCF5A8MTL0 148 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 PCDHGA12O60330 932 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 TRIM16O95361 564 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 NUDT17P0C025 328 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 CHRM3P20309 590 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 DGKAP23743 735 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 MSH2P43246 934 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 LIMK2P53671 638 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 ARHGAP8P85298 464 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 CTBSQ01459 385 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 SHBQ15464 509 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 FAM45BPQ6NSW5 357 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 UGT3A1Q6NUS8 523 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 ZNF549Q6P9A3 640 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 TAOK1Q7L7X3 1001 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 ASCL5Q7RTU5 278 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 OTOAQ7RTW8 1153 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 GKN2Q86XP6 184 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 GPATCH11Q8N954 259 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 FAM45AQ8TCE6 357 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 ELMO1Q92556 727 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 PHOX2BQ99453 314 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 PAFAH2Q99487 392 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 NDNQ99608 321 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 EDEM2Q9BV94 578 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 IL21RQ9HBE5 538 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 PARD6AQ9NPB6 346 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 TM7SF3Q9NS93 570 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 KLC4Q9NSK0 619 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 SPATS2LQ9NUQ6 558 aaKnown RBP14.95□□□□□ -0.02
SNIP1-202ENST00000468040 DNAAF2Q9NVR5 837 aaKnown RBP14.95□□□□□ -0.02
SNIP1-202ENST00000468040 SLC23A2Q9UGH3 650 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 RAPGEFL1Q9UHV5 662 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 ZNF180Q9UJW8 692 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 DOLKQ9UPQ8 538 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 KCNK6Q9Y257 313 aa14.95□□□□□ -0.02
SNIP1-202ENST00000468040 GPR179Q6PRD1 2367 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 LMO7DNF2Z398 122 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 POC1B-GALNT4F8VUJ3 575 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 LIN7AO14910 233 aaPredicted RBP14.94□□□□□ -0.02
SNIP1-202ENST00000468040 SDC3O75056 442 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 NIPSNAP2O75323 286 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 VPS26AO75436 327 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 APOA4P06727 396 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 ITGB6P18564 788 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 CD9P21926 228 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 TGM1P22735 817 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 CNTFP26441 200 aa14.94□□□□□ -0.02
SNIP1-202ENST00000468040 ACTR1BP42025 376 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms