RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MAGEE1Q9HCI5 957 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 CNGB3Q9NQW8 809 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 RRN3Q9NYV6 651 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 TBX20Q9UMR3 447 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 LSM4Q9Y4Z0 139 aaKnown RBP3.41□□□□□ -1.86
XRN1-206ENST00000467077 STON1Q9Y6Q2 735 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 USP6P35125 1406 aa3.41□□□□□ -1.86
XRN1-206ENST00000467077 ADCY9O60503 1353 aa3.4□□□□□ -1.86
XRN1-206ENST00000467077 USP54Q70EL1 1684 aa3.4□□□□□ -1.86
XRN1-206ENST00000467077 TNPO2O14787 897 aaKnown RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 WDR1O75083 606 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 TFP02787 698 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 HNRNPA1P09651 372 aaKnown RBP eCLIP3.4□□□□□ -1.87
XRN1-206ENST00000467077 IRF1P10914 325 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 COX7A2P14406 83 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 ACADSP16219 412 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 SHMT1P34896 483 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 GGT5P36269 586 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 PRELPP51888 382 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 UFM1P61960 85 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 CPSF1Q10570 1443 aaKnown RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 PEX6Q13608 980 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 CAMK1Q14012 370 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 TNS2Q63HR2 1409 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 PPIP5K1Q6PFW1 1433 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 FBXO46Q6PJ61 603 aaPredicted RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 CPLX2Q6PUV4 134 aaKnown RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 RSRC2Q7L4I2 434 aaKnown RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 LINGO2Q7L985 606 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 PKD1L3Q7Z443 1732 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 CDC20BQ86Y33 519 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 TDRPQ86YL5 185 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 FOXRED2Q8IWF2 684 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 WDR63Q8IWG1 891 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 SLC35F3Q8IY50 421 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 RNF113BQ8IZP6 322 aaKnown RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 DSELQ8IZU8 1212 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 IWS1Q96ST2 819 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 MPHOSPH8Q99549 860 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 POLR3CQ9BUI4 534 aaPredicted RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 PELI2Q9HAT8 420 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 BPIFA1Q9NP55 256 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 MKKSQ9NPJ1 570 aaPredicted RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 PPP1R14DQ9NXH3 145 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 GGA3Q9NZ52 723 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 RASAL2Q9UJF2 1139 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 TINAGQ9UJW2 476 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 KIAA1210Q9ULL0 1709 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 MRPS28Q9Y2Q9 187 aaKnown RBP3.4□□□□□ -1.87
XRN1-206ENST00000467077 ITGB4P16144 1822 aa3.4□□□□□ -1.87
XRN1-206ENST00000467077 FAM208AQ9UK61 1670 aaKnown RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 TAF1P21675 1872 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CCDC88AQ3V6T2 1871 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CCDC189A1A4V9 331 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 TMEM202A6NGA9 273 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 RRN3P2A6NIE6 340 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 E9PQ18 207 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 IFNL4K9M1U5 179 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 TAF4O00268 1085 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 LDLRAD4O15165 306 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 NCAM2O15394 837 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CIDEAO60543 219 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 TOMM70O94826 608 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CYC1P08574 325 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 G6PDP11413 515 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 EIF2S3P41091 472 aaKnown RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 MMP14P50281 582 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CLCNKAP51800 687 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 RPP30P78346 268 aaKnown RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 GALNT2Q10471 571 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 GPR68Q15743 365 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 HSP90AB4PQ58FF6 505 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 TCTEX1D4Q5JR98 221 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 WDR38Q5JTN6 314 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 FAM53AQ6NSI3 398 aaPredicted RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 RGMBQ6NW40 437 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 ERC1Q8IUD2 1116 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 ZBTB2Q8N680 514 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 RND1Q92730 232 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 MOCOSQ96EN8 888 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 SCRN2Q96FV2 425 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 APOPT1Q96IL0 206 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 TFB2MQ9H5Q4 396 aaKnown RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 TMEM30AQ9NV96 361 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 SAGE1Q9NXZ1 904 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CACNG5Q9UF02 275 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 RCOR1Q9UKL0 485 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 A4GNTQ9UNA3 340 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 KIF13BQ9NQT8 1826 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 TNRC6CQ9HCJ0 1690 aaKnown RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 BRCA1P38398 1863 aaKnown RBP3.39□□□□□ -1.87
XRN1-206ENST00000467077 UBR3Q6ZT12 1888 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 MON2Q7Z3U7 1717 aa3.39□□□□□ -1.87
XRN1-206ENST00000467077 CCDC7Q96M83 1385 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 ARFGEF1Q9Y6D6 1849 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 CROCCQ5TZA2 2017 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 TSPAN4O14817 238 aa3.38□□□□□ -1.87
XRN1-206ENST00000467077 HOXC11O43248 304 aaPredicted RBP3.38□□□□□ -1.87
XRN1-206ENST00000467077 ERVK-10P10266 1014 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms