RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 CILP2Q8IUL8 1156 aa13.78□□□□□ -0.2
TGFBR3-204ENST00000465892 CRYBG2Q8N1P7 616 aa13.78□□□□□ -0.2
TGFBR3-204ENST00000465892 ZNF300Q96RE9 604 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-204ENST00000465892 RIBC2Q9H4K1 309 aa13.78□□□□□ -0.2
TGFBR3-204ENST00000465892 TIMM13Q9Y5L4 95 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-204ENST00000465892 AP3D1O14617 1153 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 BCKDKO14874 412 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 HBP1O60381 514 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 EEDO75530 441 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 ANXA9O76027 345 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 STAU1O95793 577 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 ZNF286BP0CG31 522 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 CLCN5P51795 746 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 MRPS15P82914 257 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 FOXM1Q08050 763 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 DET1Q7L5Y6 550 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 BNIPLQ7Z465 357 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 HID1Q8IV36 788 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 ZNF540Q8NDQ6 660 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 PROKR1Q8TCW9 393 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 TSPAN17Q96FV3 270 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 BARD1Q99728 777 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 CPNE5Q9HCH3 593 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 MAGEE1Q9HCI5 957 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 HOXC10Q9NYD6 342 aa13.77□□□□□ -0.2
TGFBR3-204ENST00000465892 HOXC11O43248 304 aaPredicted RBP13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 PIRTP0C851 137 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 CD36P16671 472 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 CLK1P49759 484 aaKnown RBP13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 WNT3AP56704 352 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 CCDC58Q4VC31 144 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 B3GNT8Q7Z7M8 397 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 TMEM30AQ9NV96 361 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 COMMD8Q9NX08 183 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 GALPQ9UBC7 116 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 PCDHB14Q9Y5E9 798 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 N6AMT1Q9Y5N5 214 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 LCTP09848 1927 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 COL4A5P29400 1685 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 ASB14A6NK59 587 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 DFNA5O60443 496 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 CHRNB1P11230 501 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 SCNN1AP37088 669 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 CLK3P49761 638 aaKnown RBP13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 E2F2Q14209 437 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 PLPPR4Q7Z2D5 763 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 NLGN4XQ8N0W4 816 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 CDYL2Q8N8U2 506 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 DPF3Q92784 378 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 NCLNQ969V3 563 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 SLC47A1Q96FL8 570 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 TBATAQ96M53 351 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 DCSTAMPQ9H295 470 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 ACTR8Q9H981 624 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 NECTIN3Q9NQS3 549 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 AIG1Q9NVV5 245 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 MAGEL2Q9UJ55 1249 aa13.77□□□□□ -0.21
TGFBR3-204ENST00000465892 LINC00854A0A1B0GVQ3 168 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 S1PR4O95977 384 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 EIF2S1P05198 315 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 FGF4P08620 206 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 RPL34P49207 117 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 ST13P50502 369 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 GABARAPL2P60520 117 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 ZNF691Q5VV52 312 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 PROX1Q92786 737 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 FCRL5Q96RD9 977 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 FAM49AQ9H0Q0 323 aaPredicted RBP13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 AMBNQ9NP70 447 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 PLSCR3Q9NRY6 295 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 ADPRHL2Q9NX46 363 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 QPCTLQ9NXS2 382 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 MPP6Q9NZW5 540 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 IKZF3Q9UKT9 509 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 H0Y626 953 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 TRIM16O95361 564 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 TGFB3P10600 412 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 EPHA2P29317 976 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 ADRA1AP35348 466 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 RBBP7Q16576 425 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 ZNF549Q6P9A3 640 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 DLEU7Q6UYE1 221 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 METTL4Q8N3J2 472 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 PHF10Q8WUB8 498 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 FAM162AQ96A26 154 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 TP53INP1Q96A56 240 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
TGFBR3-204ENST00000465892 KLHL5Q96PQ7 755 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms