RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 SOX11P35716 441 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 MAPK10P53779 464 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 TNK2Q07912 1038 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 MERTKQ12866 999 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 INPP5AQ14642 412 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 NEDD8Q15843 81 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 C16orf87Q6PH81 154 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 FAM217AQ8IXS0 508 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 ALG14Q96F25 216 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 FBXL20Q96IG2 436 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 ARNT2Q9HBZ2 717 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 TUBA8Q9NY65 449 aaPredicted RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 MTF2Q9Y483 593 aaPredicted RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 ARL5AQ9Y689 179 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 ANKRD12Q6UB98 2062 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 A0A087X1B8 175 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 OR51F1A6NGY5 319 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 AURKAO14965 403 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 SMAD6O43541 496 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 NOL3O60936 208 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 CBFA2T3O75081 653 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 SUPT7LO94864 414 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 RB1P06400 928 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 CEBPBP17676 345 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 FASP25445 335 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 PSMA4P25789 261 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 ARCN1P48444 511 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 EPHA5P54756 1037 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 LMAN2Q12907 356 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 RBM20Q5T481 1227 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 FAM45BPQ6NSW5 357 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 TMEM26Q6ZUK4 368 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 ITFG1Q8TB96 612 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 FAM45AQ8TCE6 357 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 EXT2Q93063 718 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 DUS3LQ96G46 650 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 RPL10LQ96L21 214 aaKnown RBP11.09□□□□□ -0.63
COPS7B-217ENST00000461350 TRIM15Q9C019 465 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 FBXO5Q9UKT4 447 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 TRAF6Q9Y4K3 522 aa11.09□□□□□ -0.63
COPS7B-217ENST00000461350 RFXAPO00287 272 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 INSIG1O15503 277 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 MYF6P23409 242 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 NRIP1P48552 1158 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 ARSDP51689 593 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 C21orf59P57076 290 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 DNAJB13P59910 316 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 PMS2P3Q13401 168 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 AGAP9Q5VTM2 703 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 LYSMD3Q7Z3D4 306 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 LDB1Q86U70 411 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 IFNEQ86WN2 208 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 DDHD1Q8NEL9 900 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 MYLIPQ8WY64 445 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 TREX1Q9NSU2 369 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CCM2LQ9NUG4 571 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 ARMC1Q9NVT9 282 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 PTBP2Q9UKA9 531 aaKnown RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 BLOC1S6Q9UL45 172 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 OAZ3Q9UMX2 235 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 HELZP42694 1942 aaKnown RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 H3BMQ9 156 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 NME4O00746 187 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 XYLBO75191 536 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CR2P20023 1033 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 GKP32189 559 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CD97P48960 835 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 MPPE1Q53F39 396 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 FGD3Q5JSP0 725 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 EPHX4Q8IUS5 362 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 OR13J1Q8NGT2 312 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CCDC126Q96EE4 140 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 VPS50Q96JG6 964 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 COG8Q96MW5 612 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 C9orf16Q9BUW7 83 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 NPLQ9BXD5 320 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 RETREG1Q9H6L5 497 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 WNT6Q9Y6F9 365 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 SPTBN5Q9NRC6 3674 aaKnown RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 NEDD8-MDP1E9PL57 170 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 ANGPT2O15123 496 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 ZBTB11O95625 1053 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 OCM2P0CE71 109 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 OCMP0CE72 109 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 PAMP19021 973 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 CTSOP43234 321 aaPredicted RBP11.08□□□□□ -0.64
COPS7B-217ENST00000461350 RHOAP61586 193 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 BNIP3Q12983 259 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 ATP1A4Q13733 1029 aa11.08□□□□□ -0.64
COPS7B-217ENST00000461350 RAB39AQ14964 217 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms