RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 MCOLN3Q8TDD5 553 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 NSUN5Q96P11 429 aaKnown RBP15.32■□□□□ 0.04
SSR4-206ENST00000460616 TSGA13Q96PP4 275 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 ZNF300Q96RE9 604 aaPredicted RBP15.32■□□□□ 0.04
SSR4-206ENST00000460616 TSPAN18Q96SJ8 248 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 RBM4BQ9BQ04 359 aaKnown RBP15.32■□□□□ 0.04
SSR4-206ENST00000460616 CLSTN3Q9BQT9 956 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 RBM4Q9BWF3 364 aaKnown RBP15.32■□□□□ 0.04
SSR4-206ENST00000460616 BTBD2Q9BX70 525 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 PRKD2Q9BZL6 878 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 SMOC2Q9H3U7 446 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 GLOD4Q9HC38 313 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 ENTPD7Q9NQZ7 604 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 INTS6Q9UL03 887 aaKnown RBP15.32■□□□□ 0.04
SSR4-206ENST00000460616 NOTOA8MTQ0 251 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 DFFAO00273 331 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 BEST1O76090 585 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 CST1P01037 141 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 FYNP06241 537 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 ACVR2AP27037 513 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 SLC26A3P40879 764 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 MAP2K4P45985 399 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 IRF5Q13568 498 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 SMUG1Q53HV7 270 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.32■□□□□ 0.04
SSR4-206ENST00000460616 SLX4IPQ5VYV7 408 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 MFSD14CQ5VZR4 134 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 ARHGAP36Q6ZRI8 547 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 HEATR4Q86WZ0 1026 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 SVOPQ8N4V2 548 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 OR6J1Q8NGC5 347 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 PPP1R13LQ8WUF5 828 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 DUSP16Q9BY84 665 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 COMMD8Q9NX08 183 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 ERVK-18Q9QC07 812 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 DNAJB9Q9UBS3 223 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 AKT3Q9Y243 479 aa15.32■□□□□ 0.04
SSR4-206ENST00000460616 CENPBD1B2RD01 187 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 RAD51BO15315 384 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 CRCPO75575 148 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 C22orf31O95567 290 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 NDST3O95803 873 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 ZNF286BP0CG31 522 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 HOXD10P28358 340 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 ADRA1AP35348 466 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 GEMP55040 296 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 CDK5R2Q13319 367 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 DGCR6Q14129 220 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 ZNF181Q2M3W8 571 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 ZNF691Q5VV52 312 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 DCP2Q8IU60 420 aaKnown RBP15.31■□□□□ 0.04
SSR4-206ENST00000460616 PLD3Q8IV08 490 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 CNIH3Q8TBE1 160 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 LGALS12Q96DT0 336 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 UGT2B28Q9BY64 529 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 RNF19AQ9NV58 838 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 AIG1Q9NVV5 245 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 EVLQ9UI08 416 aaPredicted RBP15.31■□□□□ 0.04
SSR4-206ENST00000460616 UGT2A1Q9Y4X1 527 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 TNFRSF10AO00220 468 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 CLDN5O00501 218 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 TBX1O43435 398 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 HS6ST1O60243 411 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 CNTN5O94779 1100 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 NPPAP01160 153 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 VTNP04004 478 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 CASP3P42574 277 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 STEAP3Q658P3 488 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 TLK2Q86UE8 772 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 PIM3Q86V86 326 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 MCFD2Q8NI22 146 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 ISG20Q96AZ6 181 aaKnown RBP15.31■□□□□ 0.04
SSR4-206ENST00000460616 POLR3BQ9NW08 1133 aaPredicted RBP15.31■□□□□ 0.04
SSR4-206ENST00000460616 DDIT4Q9NX09 232 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 USE1Q9NZ43 259 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 C3orf18Q9UK00 162 aa15.31■□□□□ 0.04
SSR4-206ENST00000460616 PNMA8BQ9ULN7 279 aaPredicted RBP15.31■□□□□ 0.04
SSR4-206ENST00000460616 FRMPD3Q5JV73 1810 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 MYADML2A6NDP7 307 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 H0Y626 953 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 TSPAN1O60635 241 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 TRIM16O95361 564 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 PSMB9P28065 219 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 RYKP34925 604 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 BEX3Q00994 111 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 IL5RAQ01344 420 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 LAPTM5Q13571 262 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 NPTX1Q15818 432 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 SPESP1Q6UW49 350 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 LDB1Q86U70 411 aaPredicted RBP15.3■□□□□ 0.04
SSR4-206ENST00000460616 SVOPLQ8N434 492 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 PPM1MQ96MI6 270 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 C17orf80Q9BSJ5 609 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 TIMM22Q9Y584 194 aa15.3■□□□□ 0.04
SSR4-206ENST00000460616 A0A1B0GTL3 188 aa15.29■□□□□ 0.04
SSR4-206ENST00000460616 FAM172BPA6NC97 362 aa15.29■□□□□ 0.04
SSR4-206ENST00000460616 SAGE2PA6NJ88 616 aa15.29■□□□□ 0.04
SSR4-206ENST00000460616 MYCP01106 439 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms