RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 CCNB2O95067 398 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TGFB3P10600 412 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PRG2P13727 222 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 RFC2P35250 354 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CRATP43155 626 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KIR3DL1P43629 444 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 NDST2P52849 883 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 RAB5BP61020 215 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TGM3Q08188 693 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KLF1Q13351 362 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 DLG2Q15700 870 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 AP5B1Q2VPB7 878 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 FBXO47Q5MNV8 452 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HECTD3Q5T447 861 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KIAA1614Q5VZ46 1190 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KIAA0930Q6ICG6 404 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 OR2T5Q6IEZ7 315 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 LCLAT1Q6UWP7 414 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 USP30Q70CQ3 517 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 EEPD1Q7L9B9 569 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TXNRD3Q86VQ6 643 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TIGD4Q8IY51 512 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 OR2T29Q8NH02 315 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SLC13A3Q8WWT9 602 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KLHL6Q8WZ60 621 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TFAP2CQ92754 450 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 BIRC7Q96CA5 298 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TCEAL4Q96EI5 215 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 FBXL20Q96IG2 436 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TXNDC15Q96J42 360 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF641Q96N77 438 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SERPINB11Q96P15 392 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CSPG4P5Q96PW8 444 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 TWNKQ96RR1 684 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CTRCQ99895 268 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ABCB9Q9NP78 766 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PCDHB16Q9NRJ7 776 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ASB4Q9Y574 426 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 DIP2AQ14689 1571 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MYH7BA7E2Y1 1941 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KNDC1Q76NI1 1749 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 A0A1B0GVI7 797 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KANTRA0A1W2PQU2 76 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MID1O15344 667 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 OR10H3O60404 316 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SERPINA3P01011 423 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GM2AP17900 193 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SCNN1AP37088 669 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 OPRL1P41146 370 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CAPZA2P47755 286 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GLUD2P49448 558 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GMPSP49915 693 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ETV1P50549 477 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PGDP52209 483 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CACNB3P54284 484 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GRSF1Q12849 480 aaKnown RBP eCLIP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF177Q13360 481 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CLPPQ16740 277 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PTPN20Q4JDL3 420 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 IRAK1BP1Q5VVH5 260 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HAGHLQ6PII5 290 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 KRT77Q7Z794 578 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SCUBE3Q8IX30 993 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HS6ST3Q8IZP7 471 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SPARTQ8N0X7 666 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 VWA5B2Q8N398 1253 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 JOSD2Q8TAC2 188 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 DEDD2Q8WXF8 326 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 ASB12Q8WXK4 309 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SMARCD1Q96GM5 515 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 MUS81Q96NY9 551 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CEP41Q9BYV8 373 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 POLR2J2Q9GZM3 115 aaKnown RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 LRTM1Q9HBL6 345 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PXMP2Q9NR77 195 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 SMOXQ9NWM0 555 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 PIH1D1Q9NWS0 290 aaKnown RBP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 C1orf109Q9NX04 203 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.95□□□□□ -1.62
PCDH9-203ENST00000456367 CNTN3Q9P232 1028 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 GULP1Q9UBP9 304 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 HMGXB4Q9UGU5 601 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 VPS51Q9UID3 782 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 U3KQV3 271 aa4.95□□□□□ -1.62
PCDH9-203ENST00000456367 RAMP2O60895 175 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ENTPD6O75354 484 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ALX3O95076 343 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CCNDBP1O95273 360 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 C4BPAP04003 597 aaKnown RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 OR56A5P0C7T3 313 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 DSG3P32926 999 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ABCG1P45844 678 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 LEPRP48357 1165 aaKnown RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 AP2S1P53680 142 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 SRSF11Q05519 484 aaKnown RBP4.94□□□□□ -1.62
PCDH9-203ENST00000456367 CEACAM7Q14002 265 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 IFI44LQ53G44 452 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 ANKRD26P1Q6NSI1 321 aa4.94□□□□□ -1.62
PCDH9-203ENST00000456367 BAIAP2L2Q6UXY1 529 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms