RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 HNRNPABQ99729 332 aaKnown RBP11.92□□□□□ -0.5
SEC16A-207ENST00000453963 RACGAP1Q9H0H5 632 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TRIT1Q9H3H1 467 aaKnown RBP11.92□□□□□ -0.5
SEC16A-207ENST00000453963 GMEB1Q9Y692 573 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TEX264Q9Y6I9 313 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 AP2A2O94973 939 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 ICAM3P32942 547 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 HNF4AP41235 474 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 ARPC4P59998 168 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 IL18Q14116 193 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TMEM198Q66K66 360 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 USP43Q70EL4 1123 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 SLC24A5Q71RS6 500 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 ZDHHC21Q8IVQ6 265 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 DQX1Q8TE96 717 aaKnown RBP11.92□□□□□ -0.5
SEC16A-207ENST00000453963 NSMCE3Q96MG7 304 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TTPALQ9BTX7 342 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 XPNPEP1Q9NQW7 623 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 N6AMT1Q9Y5N5 214 aa11.92□□□□□ -0.5
SEC16A-207ENST00000453963 TREHO43280 583 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 CLDN11O75508 207 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 VNN1O95497 513 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 IFNA16P05015 189 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 CTPS1P17812 591 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 AQP1P29972 269 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 STARP49675 285 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 RHDQ02161 417 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 HNRNPDQ14103 355 aaKnown RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 ZNF829Q3KNS6 432 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 PEG10Q86TG7 708 aaKnown RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 SUN5Q8TC36 379 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 SLC13A3Q8WWT9 602 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 OR52B2Q96RD2 323 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 CXorf49A8MYA2 514 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 SLC28A2O43868 658 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 KHDRBS3O75525 346 aaKnown RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 OR4F21O95013 312 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 C9P02748 559 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 CDH1P12830 882 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 OGNP20774 298 aaKnown RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 BUD31P41223 144 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 ACADVLP49748 655 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 GPR65Q8IYL9 337 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 COPS4Q9BT78 406 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 GOLGA2P5Q9HBQ8 144 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 CNTNAP1P78357 1384 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 GPR25O00155 361 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 TBX1O43435 398 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 ACSL4O60488 711 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 SLC25A14O95258 325 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 PBX3P40426 434 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 GPD2P43304 727 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 ABRQ12979 859 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 SFT2D3Q587I9 215 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 LDB1Q86U70 411 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 MEIOBQ8N635 442 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 RNASE11Q8TAA1 199 aaKnown RBP11.91□□□□□ -0.5
SEC16A-207ENST00000453963 TIFAQ96CG3 184 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 PKP2Q99959 881 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 PDZD7Q9H5P4 517 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 TBCCD1Q9NVR7 557 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 ZNF358Q9NW07 568 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 COL20A1Q9P218 1284 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 GULP1Q9UBP9 304 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 OAZ3Q9UMX2 235 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 OR10H1Q9Y4A9 318 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
SEC16A-207ENST00000453963 EFCAB9A8MZ26 197 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 E9PAM4 449 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 ADAMTS3O15072 1205 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 TYROBPO43914 113 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 BCAS2O75934 225 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-207ENST00000453963 RGS20O76081 388 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 IFNW1P05000 195 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 ASGR1P07306 291 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 IMPDH1P20839 514 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 DNAJB1P25685 340 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 ZNF280AP59817 542 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-207ENST00000453963 RHAGQ02094 409 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.5
SEC16A-207ENST00000453963 MOGQ16653 247 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 PLEKHG6Q3KR16 790 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 GCNT6Q5T4J0 391 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 PIK3R6Q5UE93 754 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 FAM46CQ5VWP2 391 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.5
SEC16A-207ENST00000453963 PIGUQ9H490 435 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 CNTN3Q9P232 1028 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 TOR1BO14657 336 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 GABRDO14764 452 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 PSIP1O75475 530 aaKnown RBP11.9□□□□□ -0.5
SEC16A-207ENST00000453963 PGLSO95336 258 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 GNRH1P01148 92 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 PGRP06401 933 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 COL6A1P12109 1028 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 IL1R2P27930 398 aa11.9□□□□□ -0.5
SEC16A-207ENST00000453963 FAUP35544 74 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms