RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 POU6F1Q14863 301 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 LONRF2Q1L5Z9 754 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 BCL7AQ4VC05 210 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 FNBP1LQ5T0N5 605 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 PHF19Q5T6S3 580 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 FOXR1Q6PIV2 292 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 PDZD3Q86UT5 571 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 RASGEF1CQ8N431 466 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 BEND7Q8N7W2 519 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 PRELID2Q8N945 189 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 AVL9Q8NBF6 648 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 RCBTB1Q8NDN9 531 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 OR10G6Q8NH81 332 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 STYXQ8WUJ0 223 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 CCDC74BQ96LY2 380 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 CMKLR1Q99788 373 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 TBC1D10AQ9BXI6 508 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 DPH1Q9BZG8 443 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 ZCCHC2Q9C0B9 1178 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 OSGEPL1Q9H4B0 414 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 CASS4Q9NQ75 786 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 RIMKLBQ9ULI2 386 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 LOC400499M0QZD8 3231 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 KALRNO60229 2985 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 C9orf172C9J069 976 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 CEP104O60308 925 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 MSH3P20585 1137 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 MC4RP32245 332 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 ABCG1P45844 678 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 KCNJ1P48048 391 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 CDH17Q12864 832 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 GTF2H3Q13889 308 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 NFE2L1Q14494 772 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 RPE65Q16518 533 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 MAP9Q49MG5 647 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 LRRC69Q6ZNQ3 347 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 OR13J1Q8NGT2 312 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 OR2L2Q8NH16 312 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 USP7Q93009 1102 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 ULK4Q96C45 1275 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 LRRC45Q96CN5 670 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 SPRY4Q9C004 299 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 EPB41L1Q9H4G0 881 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 RAB6BQ9NRW1 208 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 ZDHHC3Q9NYG2 299 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 PAK5Q9P286 719 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 PISDQ9UG56 409 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 TTC7AQ9ULT0 858 aaPredicted RBP13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 JRKLQ9Y4A0 524 aa13.8□□□□□ -0.2
RTFDC1-204ENST00000449062 KLHL33A6NCF5 533 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 PDZK1P1A8MUH7 402 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 EFSO43281 561 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 VIPP01282 170 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 C9P02748 559 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 VCLP18206 1134 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 ITGALP20701 1170 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 ACVR1Q04771 509 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 CLN3Q13286 438 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 SEPT7Q16181 437 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 SKIDA1Q1XH10 827 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 CCDC38Q502W7 563 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 CAPRIN2Q6IMN6 1127 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 DET1Q7L5Y6 550 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 SERPINA9Q86WD7 417 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 DTX1Q86Y01 620 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 RBM12BQ8IXT5 1001 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 LILRA3Q8N6C8 439 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 BMPERQ8N8U9 685 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 AGBL5Q8NDL9 886 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 HEXDCQ8WVB3 486 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 SNRNP27Q8WVK2 155 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 KCNE4Q8WWG9 221 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 NCSTNQ92542 709 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 PDLIM2Q96JY6 352 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 ZNF778Q96MU6 729 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 INSM2Q96T92 566 aaPredicted RBP13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 COPS8Q99627 209 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 POT1Q9NUX5 634 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 OCIAD1Q9NX40 245 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 FOXJ2Q9P0K8 574 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 ACSL5Q9ULC5 683 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 PCDHGA3Q9Y5H0 932 aa13.79□□□□□ -0.2
RTFDC1-204ENST00000449062 C17orf113A0A1B0GUU1 675 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 CCDC162PA2VCL2 907 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 B4E171 279 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 AGRPO00253 132 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 DUX1O43812 170 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 NRDCO43847 1150 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 PRAMEF10O60809 474 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 JMJD7P0C870 316 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 ATP1B2P14415 290 aaPredicted RBP13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 ADRA1DP25100 572 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 ACRV1P26436 265 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 TSPAN7P41732 249 aa13.78□□□□□ -0.2
RTFDC1-204ENST00000449062 PRLHRP49683 370 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms